Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1505 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  449 bits (1156), Expect = e-130
 Identities = 246/590 (41%), Positives = 351/590 (59%), Gaps = 3/590 (0%)

Query: 248  GHTIWITENARCVRGPDNEV-LYYEGTVEDITAQRQSQETMRLLGKVFTSIAEGIVLLER 306
            G+ +WI E  + V   + E  +   GT  +IT+++  +  + L  +V  S+ E +V+   
Sbjct: 913  GNWLWILERGKVVETNNQEQPMRMTGTTRNITSRKLIENELVLSSQVLNSMNEAVVVAGL 972

Query: 307  DLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATVAAEVDRAGLWRGEIWGE 366
            D  +R+VNPAF A+TG   + +  +     A    + D   ++  ++ R   W GEIW  
Sbjct: 973  DYRIRSVNPAFSAITGYSERQISDKYLIHLAYSRQQRDLFNSIEQQLLRHKHWAGEIWIR 1032

Query: 367  RREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEHIRFQANFDMLTHLPNRHL 426
             R        + +  V    GET+H+VA  TDIT+RK+ EE +RF A+FD LT LPNR L
Sbjct: 1033 NRARKAILVWLEINQVIDVKGETSHFVAVFTDITERKKAEEDLRFLASFDTLTGLPNRTL 1092

Query: 427  IMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLKLTARRLRNCVRISD 486
              DRL  A+ QA R+   V ++FLDLDRFK INDS GH  GD +LK  A RL+N VR  D
Sbjct: 1093 FQDRLNHAISQAHRSNNIVALLFLDLDRFKHINDSMGHHIGDLLLKAVAHRLQNAVREGD 1152

Query: 487  SVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVFCIPSVGITYFPDHG 546
            +V RLGGDEF +IL  V    A   I+EK+L +   PF +    +    S+GI+ +P+  
Sbjct: 1153 TVARLGGDEFTIILEGVAKTKAATLISEKVLKAFQAPFLLDDKSLTISTSIGISLYPNDA 1212

Query: 547  ETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDLRHALARDEFELHFQ 606
            E    L++ AD AMYHAK  G   +  +T  +   +   + +E+ L+ A++R+E  L +Q
Sbjct: 1213 EDVDSLIKFADTAMYHAKALGRNNFQFYTNKLNEMATRHVQLEAGLKQAISRNELSLVYQ 1272

Query: 607  PK-VRADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIGRWTLREACDRVMSW 665
            PK      +L G EAL+RW H E G I+P +FIPLAEE+G+I  IG W +  AC ++  W
Sbjct: 1273 PKFCLRKGSLTGLEALLRWHHSELGPISPAEFIPLAEETGIINQIGHWVINHACQQLAEW 1332

Query: 666  RAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEITETVMTGDVEHAVG 725
               G    S++VN+S RQ +   ++ T+   L  +GL  +AL+LE+TE+++ G+ + +V 
Sbjct: 1333 NELGFGDISMAVNLSARQLK-ADIISTIEVALSVSGLPAKALELELTESMIMGNPQESVN 1391

Query: 726  TLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVLHSGKDAAIVSTIIA 785
             L  LK LG+T+++DDFGTGYSSL+YLK FPIDTLKID+ FVRD+ +   DAAI S IIA
Sbjct: 1392 ILSKLKALGLTIAVDDFGTGYSSLSYLKRFPIDTLKIDREFVRDITNDPDDAAITSAIIA 1451

Query: 786  LARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFTTFLR 835
            LA +L  +VVAEGVE  EQ  FL  + C   QGFL S+PL   +    L+
Sbjct: 1452 LAHSLELNVVAEGVETQEQLNFLALQGCDQVQGFLLSKPLSAQDCLALLQ 1501