Pairwise Alignments

Query, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1487 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  423 bits (1087), Expect = e-122
 Identities = 238/609 (39%), Positives = 364/609 (59%), Gaps = 12/609 (1%)

Query: 234  GEVRDFTAEV--WRCDGHTIWITENARCV--RGPDNEVLYYEGTVEDITAQRQSQETMRL 289
            GE+  F AE    R  G+  W+    R V      +E+    G   DIT QRQ ++ + L
Sbjct: 875  GEIDRFEAEYRYQRRSGNWGWLRVRGRPVSRNRTTHEIERVAGIYSDITLQRQLEDEINL 934

Query: 290  LGKVFTSIAEGIVLLERDLTVRTVNPAFEAMTGLLRQDMEGRPARLFASGLHENDFLATV 349
            L + F + +EG+++L+ D  +R  N A + + G  + D+ G+    F+  +   D L+T 
Sbjct: 935  LAQAFENTSEGVLILDVDENIRVANHAAQQIIGSEQHDLVGQS---FSQFVQMKDGLSTE 991

Query: 350  AAEV-DRAGLWRGEIWGERREGPPYSGEMTVTAVRTRAGETTHYVAAITDITKRKRDEEH 408
              ++  +   W GE     + G      + V+ +++ +  + HYV   +DIT+RKR E  
Sbjct: 992  VHQLLGQDSSWTGERELVGQNGLVCPVWLNVSVMQSASDSSVHYVIVFSDITERKRTEAD 1051

Query: 409  IRFQANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGD 468
            +R  AN+D+LT LPNR L   RL Q++  AQ+TG ++ ++FLDLDRFK +NDSYGHS GD
Sbjct: 1052 LRRLANYDVLTGLPNRSLFSSRLLQSIQTAQQTGEKLALLFLDLDRFKHVNDSYGHSMGD 1111

Query: 469  EVLKLTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGG 528
             +L   + RL++C+     + R GGDEF+++L N  + +   +IAE++L  +  PF + G
Sbjct: 1112 ALLVEASNRLQSCIGSEHLLCRFGGDEFVILLRNANNLNEINHIAERLLAQIVAPFKLFG 1171

Query: 529  TEVFCIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTM 588
             E +   S+GI+ +PD        ++NAD+AMYHAK+ G   +  ++ +   ++L  L +
Sbjct: 1172 REFYISTSIGISIWPDDAVQPEAFIKNADLAMYHAKEEGRGNFKYYSSERNAQALYHLRL 1231

Query: 589  ESDLRHALARDEFELHFQPKV---RADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESG 645
            E+DLR A+ R+EFEL++QP++   R D   IG EALIRWRHP++G I P  FI +AE  G
Sbjct: 1232 EADLRKAIEREEFELYYQPQIDILRGD-KFIGMEALIRWRHPKEGYIRPDIFIKVAEACG 1290

Query: 646  LILPIGRWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPE 705
            L++ I RW  R AC     W         +SVN+S   F+    +E +++IL +T +   
Sbjct: 1291 LVVEIDRWVFRRACLDGAKWVKRCAAPFKLSVNISAVHFRQPDFIEGLKKILADTQMPTS 1350

Query: 706  ALDLEITETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQT 765
            +L LEITE V+  +V+ A   L  LK+LG+ ++IDDFGTGYSSL YL+ F ++TLKID++
Sbjct: 1351 SLGLEITEGVLMKEVQAAKSHLTQLKELGIEVAIDDFGTGYSSLAYLRHFDVNTLKIDRS 1410

Query: 766  FVRDVLHSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPL 825
            F+ D+  +  D AIVS+II LARNL  +VVAEGVE +EQ E + SR C   QG+ +++P+
Sbjct: 1411 FLIDIATNSADQAIVSSIIELARNLKLTVVAEGVETVEQLEQVFSRGCYIVQGYYFAKPM 1470

Query: 826  PPAEFTTFL 834
               EF  +L
Sbjct: 1471 SVTEFERYL 1479