Pairwise Alignments

Query, 538 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  152 bits (384), Expect = 3e-41
 Identities = 143/515 (27%), Positives = 224/515 (43%), Gaps = 48/515 (9%)

Query: 39  TYEGLFNRVCRLASGFKALGLRPGERVAVIAEKRFDAVAAMFAVAHAGGVFVPINPVLKS 98
           TY+    R   LA G   +G++ G+ + + A    D +  MFA A  G V V +N   KS
Sbjct: 35  TYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAYKS 94

Query: 99  PQIVHILADSAAKIL-----------------VAPALRLAL---LDHTPPPSLTTLLRFG 138
            ++ +++  S  K L                 + P L+ +    L+    P L  ++  G
Sbjct: 95  HELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKLNSEEFPYLKNVIYVG 154

Query: 139 DPAPASPDPPPGGESLDLDALAGAGDPIAAHPVVD-DDPACFFYTSGSTGLPKAVVVTHR 197
                        E + L         I A   +D DD     YTSG+TG PK V++TH+
Sbjct: 155 QEKHRGMYNTT--ELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPKGVMLTHK 212

Query: 198 NLIAGAQSVASRLDNRPDDRLLAALPL----GFDAGFSQLTTAFAVGAEAVLHDYLLPQD 253
           N++     +  +     ++RL   +PL    G   G   L T    G   V+ +   P  
Sbjct: 213 NILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTH---GGTLVMLEIFDPLL 269

Query: 254 VITACAHHRITGLTGVPPLW-AQLARLDWPPAATASLRFLASTGGAMPAAVLARLRALAP 312
           V+ A    + T + GVP ++ A+ +   +     +SLR     G   P   + ++ +   
Sbjct: 270 VLAAIQKEKCTAVYGVPTMFIAEFSHPMFEMFDLSSLRTGIMAGSTCPIEAMKKVMSDMY 329

Query: 313 LARIHLMYGLTEA---FRSTTLDPERVGRKPGSVGRAVANAEVLVLHPDGGRC-APNEIG 368
           +  I + YGLTEA   F  T++D +   ++  SVG+A+ + EV ++ P+ G   AP  +G
Sbjct: 330 MREITISYGLTEASPVFTMTSVD-DPFEKRVESVGKAMPHCEVKIIDPETGETLAPGNVG 388

Query: 369 EIVHRGAFVAKGYWNDPEGTARRFRPIPPHPGEPSRPGLAVWSGDLGWQDDEGDLTIVGR 428
           EI  RG  V KGY+  PE TA           E       + SGDL  +D++G   IVGR
Sbjct: 389 EICCRGYNVMKGYYKMPEKTA-----------EVIEKDGWLHSGDLAVEDEDGYYKIVGR 437

Query: 429 SEGLIKTSGYRVSPTEIEAPAHASGLIEDAVAFGLPDPLLGERLALVVTAPPGGAPVDLD 488
            + +I   G  + P EIE   +    I DA   G+PD   GE +   V  P  G  +  +
Sbjct: 438 IKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFV-IPKEGYEIKEE 496

Query: 489 ALRRHLRAQLPAYLVPALLTQVDSLPRTASGKADR 523
            +R     ++  Y VP  +  V+  P TASGK  +
Sbjct: 497 DVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQK 531