Pairwise Alignments

Query, 301 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

Subject, 328 a.a., drug/metabolite DMT transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  220 bits (561), Expect = 3e-62
 Identities = 120/287 (41%), Positives = 173/287 (60%), Gaps = 3/287 (1%)

Query: 18  TLSGVAAIVLWSAAVALTRSLSETLGIYGAGAAIYATSGCLVWLAFGRPRVRGQSALYLW 77
           TL GVAAI+LW + +ALTR ++E     G  A IY  S   +  A G PR++  S+ Y+ 
Sbjct: 24  TLYGVAAILLWGSLMALTRRVAEEFSPIGGAALIYTVSTLFLLFAMGMPRLKAGSSRYIL 83

Query: 78  GCGGLFVVYGVSLALALGLAADRRQALDLGLINYLWPSLTLALAVPIHRLRVGWWLWPGV 137
             G LFV Y + LALALG+A+DR QA+++ +INYLWP+LT+ +AV + +  V +W++P V
Sbjct: 84  IGGALFVSYEICLALALGMASDRLQAIEMSVINYLWPALTVLIAVLLSQRAVSFWVYPSV 143

Query: 138 IVAFGGVAW--ATGGGLSLDGLAANIAGNPLAYALALTAAVAWALYSNLVRLADPKEGAL 195
            +AF GVAW      G+SL   +A IA NP  YA+ALT A  WA+Y N+ +     + A+
Sbjct: 144 GLAFAGVAWTIVAEQGISLADFSARIATNPAVYAMALTGAFIWAIYCNVTQRLARGQNAI 203

Query: 196 ALFLLASALVMAPMALLEPAPAV-VSPATLGELAVMGASTALAYMGWDVAMKRGDATLVA 254
            LF  A+A  +     L   PA+  + +++G L + G      Y  W+VA+ RG+  L+A
Sbjct: 204 VLFFAATAATLWLQYALSNEPALSFTGSSMGTLLLTGIVMGSGYALWNVAILRGNMLLLA 263

Query: 255 VLSYFTPLLSVLISALWLDTTPTPSFWMGTGLVVAGSLLCWTASRRA 301
            LSYFTP++S L S+L L      SFW G  +V  GSL+CW  +R +
Sbjct: 264 TLSYFTPVISTLFSSLILGVVLGLSFWQGVIMVTFGSLICWWVTRES 310