Pairwise Alignments

Query, 289 a.a., Polyprenyl synthetase (NCBI) from Rhodospirillum rubrum S1H

Subject, 293 a.a., polyprenyl synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  142 bits (357), Expect = 1e-38
 Identities = 96/266 (36%), Positives = 135/266 (50%), Gaps = 14/266 (5%)

Query: 4   RQHIDNVLEATMTRADLPDAPPLLAKAMRHAVFPGGGRLRPRLTLAVAAACGNDLPAAAD 63
           +Q +D  L   +   D  D  P L  AM H    GG R+RP L  AV    G  L    D
Sbjct: 10  QQRVDGQLRHFINAQD--DTEPQLKAAMEHGALIGGKRIRPFLVYAVGEMLGVPLERL-D 66

Query: 64  AAAAAIELLHCASLVHDDLPCFDDAHSRRGQASVHVAYGEPLAVLAGDALIVMAFQGLA- 122
           A AAAIE +H  SL+HDDLP  DD   RRGQ +VH+A+ E  A+LAGDAL  +AF+ ++ 
Sbjct: 67  ACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFNEATAILAGDALQTLAFEIISQ 126

Query: 123 SGLAMVPERLPLLLGIVADAVGMPAGICAGQAWESEPTVK------LAEYQRAKTGALFA 176
            G  +   +   ++  +A A G  +G+C GQA +   T +      L    R KTGAL  
Sbjct: 127 EGGELSASQQLAMVRALAKASGY-SGMCGGQAMDLNATDRQIDLETLKRLHRLKTGALIR 185

Query: 177 AST---MAGAAAAGREARSWRMLGECLGEAYQVADDLRDVAADPAELGKPVGRDAALGRP 233
            +    +  A     +A       + +G A+QV DD+ D+ A   ELGKP G D    + 
Sbjct: 186 CAVELPIIAAKVTDEQASHLLTFADAIGLAFQVQDDVLDIIASTEELGKPQGSDCESNKS 245

Query: 234 NAVGHLGIVGAVRRLESLVADAVASV 259
                LG+ GA    +SL+ DA++++
Sbjct: 246 TYPKLLGLSGAQATAKSLIEDALSAL 271