Pairwise Alignments

Query, 629 a.a., DNA mismatch repair protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

 Score =  291 bits (745), Expect = 6e-83
 Identities = 213/615 (34%), Positives = 302/615 (49%), Gaps = 76/615 (12%)

Query: 1   MTIRLLPPVLVNRIAAGEVVERPASAVKELVENAIDAGASRIDITMTDGGRARILVVDDG 60
           MTIR+LP  L N+IAAGEVVERPAS VKELVEN++DAGA+RIDI +  GG   I + D+G
Sbjct: 1   MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60

Query: 61  RGMDPGELSLAVERHATSKLPG-DDLLDIHTLGFRGEALPSIGSVARLTLTSRAAGAGDA 119
            G+D  EL LA+ RHATSK+   DDL  I +LGFRGEAL SI SV+RLTLTSR     +A
Sbjct: 61  SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120

Query: 120 WALTVEGGAKG-EPEPASHPQGTRVEVRDLFYATPARLKFLKAPRTEQMHAVDVVHRLAM 178
           W+   EG     + +PA+HP GT VEV DLF+ TPAR KFL+  +TE  H  +++ R+A+
Sbjct: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180

Query: 179 AHPAVGFTLSDGTRQQIRLSGAQGELFEARLT------RLGAILGREFSDNAIAIEAERE 232
           +   V FTL        R +G     + A  T      RL A+ G  F  + + IE E +
Sbjct: 181 SRFDVSFTL--------RHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQ 232

Query: 233 GIRLTGHAALPTYNKATSAGQYLFVNGRPVRDKLLHGAVRGAYQDVLAHDRNAVLALYLD 292
           G++L G    P   +  S  QY +VNGR +RDKL++ A+R +Y+  L  D+ A   L+++
Sbjct: 233 GLKLHGWITTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIE 292

Query: 293 LPPEMVDVNVHPAKAEVRFRDPGLVRGLIIGALRHALAAAGHRASSTVSLAALGALRPAQ 352
           L P  VDVNVHPAK EVRF    LV   I  AL  AL       + T++  A      A+
Sbjct: 293 LDPHQVDVNVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHCAE 352

Query: 353 GSGAPALPWGAGGYGGGASHPGLEERRSAYAAQAPAGTPD-------------------- 392
               P +P              ++  +     QA   TPD                    
Sbjct: 353 EVNPPVVPM-------------IDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVR 399

Query: 393 ------PWAGRGMGAGGGS---GQAAMAWLAGA---------------PPAAPRLAGEPE 428
                 PW      A  G    G A+++    A               P  A  +    E
Sbjct: 400 ERAVSNPWVASPKTASTGKERYGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIE 459

Query: 429 APPTGAEDFPLGAARGQIHDTYIIAQTRDGVVIVDQHAAHERLVMERMKAALAERGEVAR 488
           A         LG A   +   Y++  +  G V++  + A +  +   +    A+ G +  
Sbjct: 460 AVKANIAIEKLGKAIQVVAGQYLLMSSPQGCVLISLYQAQQLKLRGLLN---AQHGALKA 516

Query: 489 QILLLPEVVELDEPGAVRVATAAAELAKLGLVVEGFGPGAVVVREVPALLGDTDVKGLVA 548
           Q LL+P  ++L+E         ++ L +LG+ ++     +++V  VP  L   +++ L+ 
Sbjct: 517 QPLLVPLALKLNESEWQVAQRHSSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLLP 576

Query: 549 DLAEGLAEWGTAQAL 563
           DL    A    +QAL
Sbjct: 577 DLLSYAASCSESQAL 591