Pairwise Alignments

Query, 629 a.a., DNA mismatch repair protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 586 a.a., DNA mismatch repair endonuclease MutL from Synechocystis sp000284455 PCC 6803

 Score =  155 bits (391), Expect = 6e-42
 Identities = 116/345 (33%), Positives = 177/345 (51%), Gaps = 14/345 (4%)

Query: 3   IRLLPPVLVNRIAAGEVVERPASAVKELVENAIDAGASRIDITMTDGGRARILVVDDGRG 62
           I++L   LV+ IAAGEV++ P + V+ELVENA+DAGA RI +      + R+ V+D+G+G
Sbjct: 32  IQVLDRQLVDLIAAGEVIDSPLAVVRELVENALDAGADRI-LVRVWWDQWRLEVLDNGQG 90

Query: 63  MDPGELSLAVERHATSKLPGD-DLLDIHTLGFRGEALPSIGSVARLTLTSRA-AGAGDAW 120
           MD  EL  +V  HATSK+    DL  I TLGFRGEAL S+  VARLT++SR+ A  G  W
Sbjct: 91  MDVTELKTSVLPHATSKISTQADLQRIKTLGFRGEALHSLAQVARLTISSRSVASPGCGW 150

Query: 121 ALTVE-GGAKGEPEPASHPQGTRVEVRDLFYATPARLKFLKAPRTEQMHAVDVVHRLAMA 179
            +T    G+  + EP +   GTRVEVR LF   P R +     +      V  + +LA+ 
Sbjct: 151 RITYSPQGSPEQIEPVAIAMGTRVEVRQLFANFPQRRQAFAKSQQFWRPMVTYLQQLALC 210

Query: 180 HPAVGFTLSDGTRQQIRLS---GAQGELFEARLTRLGAILGREFSDNAIAIEAEREGIRL 236
           HP V + L    R ++ LS     +  L +   +     LG  ++  ++++  + E    
Sbjct: 211 HPQVTWQLWQDERLRLSLSPGPNPEAILLQCLKSLQAGQLG--YTQQSLSLPVDLENQAT 268

Query: 237 TGHAAL-----PTYNKATSAGQYLFVNGRPVRDKLLHGAVRGAYQDVLAHDRNAVLALYL 291
           +   +L        ++       + +NGRPV    L   +   +   L   R  +   + 
Sbjct: 269 SAQLSLTFGYPDRCHRPRPDWLIIAINGRPVNVPELTQTILAVFHRTLPRQRYPLCFAHW 328

Query: 292 DLPPEMVDVNVHPAKAEVRFRDPGLVRGLIIGALRHALAAAGHRA 336
            LPP+ +D + HPAK E+  +D    +G +   L  +LA  G+ A
Sbjct: 329 QLPPQCIDWHRHPAKTEIYLQDLPHWQGQLKTLLHQSLAILGNDA 373



 Score = 69.7 bits (169), Expect = 3e-16
 Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 24/188 (12%)

Query: 442 ARGQIHDTYIIAQTRDGVVIVDQHAAHERLVMERMKAALAERGEVARQILLLPEVVELDE 501
           A  Q+  TY++ +   G+ +V+QH AHER++ E+++           Q L L + + L  
Sbjct: 411 AIAQVCQTYVVVEHDQGIWLVEQHVAHERVLFEQLQRHW--------QCLPLEQPLVLQG 462

Query: 502 PGAVRVATAAAELAKLGLVVEGFGPGAVVVREVPALL-GDTDVKGLVADLAEGLAEWGTA 560
               +V      L  LGL ++ FG     VR +PALL G  ++  ++ +L++ +    TA
Sbjct: 463 FNPEQVE----RLQNLGLEIDPFGEDIWAVRSLPALLQGQEEIIAILRELSQ-VFSLSTA 517

Query: 561 QALEDRLGDVVATMACHGSVRAGRRLRIEEMNALLRDMERTPRAGQCNHGRPTYVELRLG 620
           QA           +AC  +++ G  L    +N L+   ++      C HGRP Y+ L   
Sbjct: 518 QA----------AIACRSAIKNGMELDRIAINKLIEQWQQCDNPHTCPHGRPIYLALDES 567

Query: 621 DIERLFGR 628
            + R F R
Sbjct: 568 SLARFFRR 575