Pairwise Alignments

Query, 605 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

Subject, 604 a.a., MsbA-like saccharide exporting ABC transporter ATP-binding/permease subunits from Sinorhizobium meliloti 1021

 Score =  275 bits (703), Expect = 4e-78
 Identities = 199/534 (37%), Positives = 288/534 (53%), Gaps = 45/534 (8%)

Query: 75  LMLIALAFPVAFVLKGLANYGQRTLMNRVGLRVVQRCREALYDHLQGMDIAFFAQQQTAA 134
           +ML+AL+F  A +L+ +   G  +L     L+++     A + H+Q     + A     +
Sbjct: 78  MMLMALSFG-AIILRHVTFMGIVSLT----LKMMSDIAAAAFHHIQRFSSDWHANSFAGS 132

Query: 135 LVSRFT-----VDL---TLLKNTITSGIMVVGRDAVT-----MVSLVVSLFLLDIELALI 181
            V + T     +DL   TLL     S +M+VG  A+      M+ +++ L      +A I
Sbjct: 133 TVRKVTRGMWALDLLNDTLLVALFPSIVMLVGSTALMAWYWPMMGVIIGLG----SIAFI 188

Query: 182 AVTVFPAA--VLPIALLGKRVRKAARGMQAQSGQLDALLLQVFQAIRVVKVYNAGEHERA 239
           AVTV  +   V P+A L            +   +L   L        VVK + A   E A
Sbjct: 189 AVTVSLSLGYVAPMASLAN----------SWDTRLGGALADAVSCNTVVKAFGAEGREDA 238

Query: 240 RVAATV----DRIYRHLMRSERIGAAISMVVEILSGFAFA-AVVIYGGQRVTAGDLDPGT 294
           R+A  +    +R  R   R    G A   ++ +L       A++++   + TAGD+   T
Sbjct: 239 RLAKVLRKWENRTRRTWSRGTLNGTAQGAMLLVLRAAVIGFALLLWARGQATAGDI---T 295

Query: 295 FFAFITSLFLLYQPIKRIGGVNVVAQEGMAAVERMYGVIDTPPALREGKDAPALVVGGGE 354
           F   +TS F+L   ++ +G      Q  +  +E +  +   P  + +   A  + +  GE
Sbjct: 296 FV--LTSFFILQGYLREVGMHIRNLQRSINDMEELVAIHAQPLGVEDRPGAKPIRITEGE 353

Query: 355 IVFDDVRLTYPTQEGPALDGLSFRAPAGATVALVGRSGAGKSTALQLVPRFYDADGGRVL 414
           I F DV   Y     P  +G S    AG  V LVG SG+GK+T ++L+ R +D + G + 
Sbjct: 354 IEFRDVTFHYGAHRAPLYEGFSVNIAAGERVGLVGHSGSGKTTFIKLIQRLHDLNAGEIR 413

Query: 415 IDGQDVRAVTFRSLWAAIAMVTQEIILFDDSVRANIAYGRPGASQAEIEDAARHAAAHDF 474
           IDGQ++   T  SL   IA+V QE ILF  S+  NIAY RPGA+Q +IE+AAR A+AHDF
Sbjct: 414 IDGQNIADFTQASLRQQIAIVQQEPILFHRSLAENIAYARPGATQRDIEEAARLASAHDF 473

Query: 475 ILALPEGYDTVIGEQGTRLSGGQRQRLVIARAMLKNAPILLLDEATSALDTESERHVRQA 534
           I ALP+GY T++GE+G +LSGG+RQR+ IARA L +APIL+LDEATS+LD+ESE  ++QA
Sbjct: 474 IAALPKGYGTLVGERGVKLSGGERQRVAIARAFLADAPILILDEATSSLDSESEVLIQQA 533

Query: 535 FERLRQGRTCIVVAHRLSTVMNADIIHVIDAGRIVESGSHAALL-AEGGLYADL 587
            ERL  GRT +VVAHRLSTV   D + V D GRI E G H AL+  +GG+Y  L
Sbjct: 534 MERLMTGRTTLVVAHRLSTVRALDRLLVFDRGRIAEEGDHGALIRVKGGIYRSL 587