Pairwise Alignments

Query, 605 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

Subject, 601 a.a., lipid ABC transporter permease/ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  419 bits (1076), Expect = e-121
 Identities = 230/582 (39%), Positives = 343/582 (58%), Gaps = 2/582 (0%)

Query: 7   REAGEAEAAGPSTLRLVGRLIKDHLAQQWGLIALAVLCMLAVAASTSAIAWLMKPAVNDV 66
           ++  E E    +   ++ R+I ++     G  A A+ C++ VAA+T+  AW+ +  +N+ 
Sbjct: 4   KDRKEREVDNETIAGILRRVIAENGRDHIGGYAFAIACLMVVAATTAFTAWISETVINEA 63

Query: 67  FARHDRDVLMLIALAFPVAFVLKGLANYGQRTLMNRVGLRVVQRCREALYDHLQGMDIAF 126
           FA    DV++L+  +   AFVL+GLA YGQ   ++++G  +V   +  LY HL  + I F
Sbjct: 64  FAHKRGDVVLLVCFSIFAAFVLRGLATYGQAVALSKIGNSIVASYKRRLYTHLMALSIGF 123

Query: 127 FAQQQTAALVSRFTVDLTLLKNTITSGIMVVGRDAVTMVSLVVSLFLLDIELALIAVTVF 186
           F ++++A L ++   +++ +++ +   +  V RD +T+V LV  +   D  L+LI     
Sbjct: 124 FQEKRSAHLTAKINQNISGIRDVLNMTVTSVARDVLTLVGLVGVMISKDWLLSLITFVGA 183

Query: 187 PAAVLPIALLGKRVRKAARGMQAQSGQLDALLLQVFQAIRVVKVYNAGEHERARVAATVD 246
           P  +L +  + +R+R A R     + ++   + +  Q I +VK +   +    +V   + 
Sbjct: 184 PPLLLGLRYISRRLRLATREAVEANSRVLGAMQETIQGISIVKAFTMEDELGRKVEGIIK 243

Query: 247 RIYRHLMRSERIGAAISMVVEILSGFAFAAVVIYGGQRVTAGDLDPGTFFAFITSLFLLY 306
                  R  R+    + + E  +G A + V+ Y   R    ++ PG  FAF+T+L L Y
Sbjct: 244 GAENRANRIARLSERTAPLTETFAGLAISGVLAYAAFRTIYSNVAPGALFAFVTALLLAY 303

Query: 307 QPIKRIGGVNVVAQEGMAAVERMYGVIDTPPALREGKDAPALVVGGGEIVFDDVRLTYPT 366
            P++R+  + V  +        +Y ++DT P  R+   A  L      + F DVR +Y  
Sbjct: 304 DPVRRLARLQVSLERAAVNARMLYEILDTVPHQRDLPGARQLAFSEATVEFRDVRFSYGN 363

Query: 367 QEGPALDGLSFRAPAGATVALVGRSGAGKSTALQLVPRFYDADGGRVLIDGQDVRAVTFR 426
            E   L G+SF A  G T ALVG SGAGKST + L+PRFYD   G +LIDGQD+ AVT +
Sbjct: 364 GE-EVLKGVSFLAEGGKTTALVGPSGAGKSTIISLIPRFYDPQSGVILIDGQDIAAVTKQ 422

Query: 427 SLWAAIAMVTQEIILFDDSVRANIAYGRPGASQAEIEDAARHAAAHDFILALPEGYDTVI 486
           SL   +A V+Q+  LF+ S+R NI YGRP A+ AE+E+AAR A AHDFILA P+GYDT +
Sbjct: 423 SLRNGLAYVSQQAYLFEGSIRDNIRYGRPEATDAEVEEAARLAYAHDFILAQPQGYDTPV 482

Query: 487 GEQGTRLSGGQRQRLVIARAMLKNAPILLLDEATSALDTESERHVRQAFERLRQGRTCIV 546
           GEQG  LSGGQRQRL IARA+++NAPILLLDEATSALDTESE  V++A ++   GRT IV
Sbjct: 483 GEQGMTLSGGQRQRLSIARALVRNAPILLLDEATSALDTESEAAVQKALDQAMSGRTVIV 542

Query: 547 VAHRLSTVMNADIIHVIDAGRIVESGSHAALLAE-GGLYADL 587
           +AHRLSTV+NAD I V++ G +VE G+H  L     G+YA L
Sbjct: 543 IAHRLSTVVNADKIVVMNEGLVVEEGTHEELARRPDGVYARL 584