Pairwise Alignments

Query, 1009 a.a., Acriflavin resistance protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 1008 a.a., RND multidrug efflux transporter; Acriflavin resistance protein from Pseudomonas fluorescens FW300-N2E2

 Score =  371 bits (953), Expect = e-106
 Identities = 264/1006 (26%), Positives = 486/1006 (48%), Gaps = 38/1006 (3%)

Query: 10  IRNPIPPIVLFLALTIAGLIAFTKLPVTSMPSVIVPVVSVTISQPGASPTEIESQITRRV 69
           IR P+   V+ L + + G  A++KLP+   P +   +++VT + PGA+   I+  IT+ +
Sbjct: 8   IRRPVLATVVSLLIVLLGFQAWSKLPLRQYPQMENALITVTTAYPGANAETIQGYITQPM 67

Query: 70  EGALAGLRGVKHITSTISEGTSLSTVEFHLETDFDRAMSDTRDAITNIRDQLPRSILEPQ 129
           + +LA   G+ ++TS   +  S+ +V   + ++ DR  ++       +++QLP+   +P 
Sbjct: 68  QQSLASAEGIDYMTSVSRQNFSVISVYARIGSNSDRLFTELLAKANEVKNQLPQDAEDPV 127

Query: 130 VQRVEIDGGALLAFSVEAPEMRAEDLAWFIDDTVSRNLLAVPGVASVRRQGGVVHEITVT 189
           + R   D  AL+  S  + E+    +  ++   +   L  +PG+A     G  V  + + 
Sbjct: 128 LSREAADASALMYISFFSKELNNPQITDYLSRVIQPKLATLPGMAEAEILGNQVFAMRLW 187

Query: 190 LDPAKLAAFSVTAAEISRQLALTTIDLPGGRLIEGEREYSLRTLGG---AQSASALRDIW 246
           LDP KLA F +TAA+++  +         G   E + EY + ++      +SA A   I 
Sbjct: 188 LDPVKLAGFGLTAADVTNAVRQHNFLSAAG---EVKGEYIVTSINANTELKSAEAFAAIP 244

Query: 247 IGLGSGRGVRLGDIAEVTDGGAEARSITRLDGKPVVTFAVFRAKGASEITVGESVKRALE 306
           +       V L D+A V  G     +I+   G P V   +    GA+ + V + V++ + 
Sbjct: 245 LKTDGDSRVLLRDVARVEMGAENYDTISSFGGTPSVYIGIKATPGANPLDVIKEVRKIMP 304

Query: 307 DSQAADPFVTYKEI-FSLVDFTQTSYQSTLYVFFEGAILTILTVFLFLRDRRATALAALT 365
           D +A  P     EI +    F Q S    +   FE  ++ I+ VFLFL   R+  +  +T
Sbjct: 305 DMEAQLPANLKAEIAYDATLFIQASIDEVVKTLFEAVLIVIVVVFLFLGALRSVVIPVVT 364

Query: 366 IPLSIIPTFLVLYFLGFSLNFVSLMAISLVTGVLVDDAIVEIENIHRHMAQAKGPYDAAM 425
           IPLS+I     +  +G+S+N ++L+A+ L  G++VDDAIV +ENIHRH+ + K P+DAA+
Sbjct: 365 IPLSMIGVMFFMQLMGYSMNLLTLLAMVLAIGLVVDDAIVVVENIHRHIEEGKTPFDAAI 424

Query: 426 IAADEIGLAVVATTAVICAVFMPVSFMGGAAGKFFIQFGVTVSVAAFFSLMVARLLTPMI 485
             A EI + VV+ T  + AV+ P+  + G  G  F +F +T++ A   S +VA  L+PM+
Sbjct: 425 EGAREIAMPVVSMTITLAAVYAPIGLLQGLTGALFKEFALTLAGAVVISGIVALTLSPMM 484

Query: 486 AAYGLKAPAHRDDKPGL----------WGLRYRHLVVWTLDNRGKTLGIAALSVVLSFGL 535
            A  L+   H ++  GL             RY+ ++  TL+ R   L  A + ++L   L
Sbjct: 485 CAMLLR---HDENPSGLAHRLDMVFERLKSRYQRMLHGTLNTRPVVLVFAVIVLLLIPVL 541

Query: 536 VPYLSTGYLPYEDYAQSSMTIELPRGATLEQTDAVALRVVDILKKHPEVMYVLTSAGGET 595
           + +  +   P ED     M    P+   L+  +      + I K+ PE  Y      G  
Sbjct: 542 IMFTKSELAPDEDQGIIFMMANAPQPTNLDYLNTYTDHFITIFKEFPE-YYSSFQINGYN 600

Query: 596 GVNTATVEIKLLPLKARNVSQRGFESQVLSELTDLPDVRIKFAN----SGGSKDISIALT 651
           GV +      L P   R+ +Q     +V ++L  +P ++I   N     G  + +  A  
Sbjct: 601 GVQSGIGGFLLKPWNERSRTQMEILPEVQAKLESVPGLQIFGFNLPSLPGTGEGLPFAFV 660

Query: 652 ----GENAAALDAAARAIERDMRGIAGLIA-VGSTAPSEQPEIVILPDFAKAAQLGVTVQ 706
                + A  L+ A R  +R +   +G  A +      ++PE+V+  D AKAAQ+GV++Q
Sbjct: 661 INSPKDYATLLEIAERVKKRALE--SGKFAFMDIDLAFDKPEVVVDIDRAKAAQMGVSMQ 718

Query: 707 ALSDAVNIATIGDIDTNLAKLNHDGRQFAIRVRLASGPTTTLDTIGELRIPTSEGGSVPL 766
            L   +    +G+ + N  +   +GR + +  ++        D +    +  ++G S+PL
Sbjct: 719 DLGGTL-ATLLGEAEIN--RFTLEGRSYKVIAQVERPFRDNPDWLNNYYVKNAKGESLPL 775

Query: 767 SALAEIRFGSGPASIERYDRRRKIAVEANLVDLSLGDALQLISDLPSMKALPKGIEALNT 826
           S L ++   + P  + ++ +   + +    V +S+G+A++ +  +   +A P G      
Sbjct: 776 STLIKVSDRARPRQLNQFQQLNAVTISGFPV-VSMGEAIETVRQIAREEA-PAGFAFDYA 833

Query: 827 GDVEEMTDLFSRFLTAIGAGLMMVYAIQVLLYKDWIQPFTRMAALPLSIGGAFLALVLTN 886
           G   +     S         L +++ +    ++ +  P   +  +PLSI GA + L L  
Sbjct: 834 GASRQFVQEGSALWVTFALALAIIFLVLAAQFESFRDPLVILVTVPLSICGALIPLFLGW 893

Query: 887 TDLNMPAAIGILMLMGIADKNSILLVDYMVE-RIRQGVPRREAIIESCAVRARPIIMTSL 945
           + +N+   +G++ L+G+  K+ IL+V++  + R  Q +  REA+ ++ ++R RP++MT+ 
Sbjct: 894 SSMNIYTQVGLVTLIGLISKHGILIVEFANQLRREQNLTPREAVEQAASIRLRPVLMTTA 953

Query: 946 AMLAGMVPIVLGIGLDTAFRAPMAVAVIGGLISSTALSLVFVPVLF 991
           AM+ GMVP++   G     R  +   +  G+   T  +L  +P ++
Sbjct: 954 AMVFGMVPLIFATGAGAVSRFDIGTVIATGMSIGTLFTLFVLPCVY 999