Pairwise Alignments

Query, 620 a.a., DNA primase (NCBI) from Rhodospirillum rubrum S1H

Subject, 651 a.a., DNA primase from Pseudomonas syringae pv. syringae B728a

 Score =  319 bits (818), Expect = 2e-91
 Identities = 174/416 (41%), Positives = 253/416 (60%), Gaps = 5/416 (1%)

Query: 3   LPNAFLDELRARLTLSSVVGRRVKLARKGREFLGLCPFHNEKSPSFTVNDEKGFFHCFGC 62
           +P +F+D+L  R  +  VV  RV+L + G+ +   CPFH EK+PSF+V+ +K F++CFGC
Sbjct: 5   IPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGC 64

Query: 63  GAHGDVIGFEMRAANIAFREAVERLSAEAGLEMPRETAEDRDRSRQAASHR--EIMEMAC 120
           GA G+ +GF M   N+ F +AVE L+  AG+E+PRE +    + RQ        ++  A 
Sbjct: 65  GAGGNALGFIMDHDNLDFPQAVEDLAKAAGMEVPREQSVKGQKPRQPTDSPLYPLLTAAA 124

Query: 121 AFYQKALRL-PEGRGAMEYLRGRGLDDATLARFRLGFSPQG-GALKAALAREGVDEQAMV 178
            FY++AL+  P  + A++YL+GRGL       F LGF+P G   L   L+ + + ++ M+
Sbjct: 125 EFYRQALKSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLYKHLSSDSLQQKVMI 184

Query: 179 DLGLILRSDDGRPAFDYFRGRVMFPIGDPAGRVVAFGARILGEGQPKYLNSPDTPLFHKG 238
           D GL++ + +    +D FR RVMFPI D  GRV+AFG R+LG+ +PKYLNSP+TP+FHKG
Sbjct: 185 DAGLLIENAETGKRYDRFRDRVMFPIRDSRGRVIAFGGRVLGDDKPKYLNSPETPVFHKG 244

Query: 239 HSLYNLGPAREAARQSGAIIVAEGYMDVIALARAGLGWAVAPLGTALTEAQMEALWRTIP 298
             LY L  AR+  R    IIV EGYMDVIALA+ GL  AVA LGTA +E  ++ L+R +P
Sbjct: 245 QELYGLFEARKFNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLFRVVP 304

Query: 299 EPVLCFDGDGAGRRAAARAMERALPLIGPGRSLRFALLPGGRDPDDLLREGGPVALR-QV 357
             + CFDGD AGR AA RA+E  L  +  GR  RF  LP G DPD L+R  G  A + ++
Sbjct: 305 NVLFCFDGDQAGRNAAWRALEATLSNLQDGRRARFLFLPEGEDPDTLVRSEGTDAFKARI 364

Query: 358 LDVAVPFSEMAWRELSEGQALTTPEQRAALEAAIDAFVAKIADRSLQGHYRQALRD 413
              A P ++  + +L++     + E +A +       + K+   +L+   RQ L +
Sbjct: 365 NQHAQPLADYFFEQLTKESDPRSLEGKAHMATLAAPLIDKVPGANLRILMRQRLTE 420