Pairwise Alignments

Query, 394 a.a., Extracellular ligand-binding receptor (NCBI) from Rhodospirillum rubrum S1H

Subject, 381 a.a., ABC-type branched-chain amino acid transport system, periplasmic component from Dechlorosoma suillum PS

 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 16/348 (4%)

Query: 12  ALLAMLGLGLVSPSAAREDTGEGVSQEPALLLGYELPLTGANAAYGRVFQEAARLQLDRF 71
           A L M    L+S +A  E+   GV+ +  + LG   P +G N  YG   +E+     ++ 
Sbjct: 9   ASLLMASCALLSGAAMAEN---GVT-DSTITLGMSAPFSGPNGIYGTEMRESITAYFEQI 64

Query: 72  NAAGGVGGRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDFSSTVSMAAGSIYGKE 131
           N  GG+ GR ++++  D   + D+A    +  + D +   +L  + S+ + AA  ++   
Sbjct: 65  NKGGGINGRKLELVSLDDGYETDRAVANTKKLIHDEKAFALLAFYGSSPTTAAMEVFSGA 124

Query: 132 GMPQLSPTAAHPDYIK--ISPWQFRAITTPAFEGPNNAAWMIGDGFTSVAVIGVTTDWGL 189
            +P L  T +  + ++  ++ + F    + A E     + +   G  ++AV      +G 
Sbjct: 125 KVP-LVGTISGAETLRNPVNRYMFNVRASYANETDAIVSQLASLGLKNIAVFYQNDGFGK 183

Query: 190 SSAQAFRKAFELRGGAVVVNEEVPPGNRRFDDVIDEIEDEAPQAIYLAMAYEDAAPFLRA 249
           S       A +  G A      V   +      ++ I    PQA+ +   Y+  A F+R 
Sbjct: 184 SGLDGVTAALKKHGLAPSAVGTVERNSLDVAKAVEAISKVTPQAVIMVTLYKPTAEFVRQ 243

Query: 250 LRARGS-----ALPVYGSSALYSPKFIDLGGPAVEGVRLATAFVLGASDPVVVEFVSAYE 304
           +R  G       L   G+  L      D  G    G+     +    S+P+V E+     
Sbjct: 244 MRKHGQNPQFMTLSPVGADLLVKELGNDARG---IGISQVMPYPWNDSNPLVREYRKLMT 300

Query: 305 TL-YGAIPTLFAAHGYDAVGIMLAAVGRAGPEVTRESLRDALAATDRY 351
           T+   +    +   GY    +M+  + RAG ++TR+ L  AL +   Y
Sbjct: 301 TMGKQSQSPYYGVEGYAMAKVMVEGIKRAGKDLTRDKLTTALESMGSY 348