Pairwise Alignments

Query, 289 a.a., Flagellin-like (NCBI) from Rhodospirillum rubrum S1H

Subject, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 17/276 (6%)

Query: 1   MADNITLSSSTRSNLLALTRTTDLIGRTQDRLSTGKAVNSAIDDALSFFKARNLNSRATD 60
           MA N+  + +  +    LT  T+    + +RLS+G  +NSA DDA     +  LN ++  
Sbjct: 1   MAVNVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRG 60

Query: 61  LATIKNGISEGIQVLKTATDALENVEDVLKQMKAIAASAKATASADSTTRAKLSSQFNEL 120
           L       ++GI + +TA  A+    ++L++M+ ++  + A  S   + R  +  +   L
Sbjct: 61  LDVAVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQS-ANGSNSKSERVAIQEEITAL 119

Query: 121 RSQIDHLTNDANYGGVNLIKSGADTLTVKFSESPSASDRKLVIKGIASNVDGTSGISVSS 180
             +++ +    ++GG  L+     T + +   + +     L +K + S+     G S  +
Sbjct: 120 NDELNRIAETTSFGGNKLLNGTFSTKSFQIG-ADNGEAVMLTLKDMRSDNRMMGGTSYVA 178

Query: 181 AQNAAAGWADTTVSVYGGVIDNAINQIDSALTTVRDSAQTFGTNASMLQIREDFTSTLIN 240
           A+     W           +    N I   L  +  + QT   NA      E+  +T IN
Sbjct: 179 AEGKDKDWK----------VQAGANDITFTLKDIDGNDQTITVNAKEGDDIEE-VATYIN 227

Query: 241 TLEGGAADLVNADLNKESANMLSLKTRQQLGTISLS 276
               G  D+V A +N++    +     +  G ++ S
Sbjct: 228 ----GQTDMVKASVNEKGQLQIFAGNNKVTGDVAFS 259