Pairwise Alignments
Query, 937 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H
Subject, 790 a.a., hypothetical protein from Burkholderia phytofirmans PsJN
Score = 287 bits (734), Expect = 2e-81
Identities = 197/555 (35%), Positives = 282/555 (50%), Gaps = 39/555 (7%)
Query: 374 EVLGVLEPALARFPGDVG----LLATLGLHYFQENAYEDCATVFETVLAKKPDHVEARAS 429
E L L A FP ++ L TL L ++C +LA PD+ EA+
Sbjct: 231 EALAPLRKAAELFPEELESRTVLADTLRLKGLPAETEQEC----RKILAINPDYAEAQRI 286
Query: 430 LGVVRWSQGRLVESLALAQSIREDFPEDIRTLFLLGCVHSDLMENASALEVFDLAVEKGG 489
G+ QGR+ E LA A+ E P + LG + DL + A + F A+EK
Sbjct: 287 FGMSLVHQGRVAEGLAAARRAIELAPNNSTAYSTLGVLLLDLGFVSEAEKEFRAALEKD- 345
Query: 490 ERVPPFHYS--NCCFSFHYVEAMEKDDLFARHRRWDALYGAGATELSDVTHHNTRDPERR 547
P H + N F+ + ++ LFA H + A H N R P+R+
Sbjct: 346 ---PKDHIAANNFLFTLSHNPEIDHGTLFAEHTNF-ARQHEDPVRAQWPRHVNKRSPDRK 401
Query: 548 LRIGYVSPDFRRHSVAYFFLPLVG--AHDRAAVEVTCYSLSTLTDQMTDLIREGCDRWRD 605
L+IG VS D RH+VA + LP++ A D + + Y+ D T L+R D W
Sbjct: 402 LKIGLVSGDLFRHAVASYLLPIMEHLAKD-PNLSLHVYNNHIAEDDYTQLLRNCADEWHQ 460
Query: 606 ITTLPAEKAAERVREDEIDILVDLSGHTANNGLSIFALKPAPVQVTYLGYPNTTGLSAID 665
IT +P + A ++R++ IDIL DLSGHT N L FA KPAP+QVT++GYP TTGLSA+D
Sbjct: 461 ITGMPDAQLANKIRDERIDILFDLSGHTGRNRLLTFARKPAPIQVTWMGYPGTTGLSAMD 520
Query: 666 YRLTDGFADPLGVDEDPASETLWRLPRSFLLFDEVPGLPDPAPP----PVLSRGTITFGS 721
Y L D + P G E+ SE + LP S E APP P + G +TFGS
Sbjct: 521 YYLADKYGVPFGPAENQFSEKIVHLPSSATFLPE-----QSAPPVNILPAMHNGYVTFGS 575
Query: 722 FNNMAKVNRGCVAVWKRILDAVPGSRLLLKAKGFRDPATAKVLIERLIDW----GVDPEQ 777
FN + K+ R +A+W +L A P +++LL A + + LIDW G++ E+
Sbjct: 576 FNRLNKLRRDVIALWAELLRAQPTAKMLLGAIATDEDE------QLLIDWFAGEGIERER 629
Query: 778 VSYAPYAKNLMEHVAVYAEVDIALDTFPYNGTTTTFEALHMGVPVIGLRGHRHSGRVGAS 837
+ + ++ ++ + VDI LDTFPY G+TT +L MGVP + + G + R G +
Sbjct: 630 LMFR-RRSSIPVYLQQHFHVDICLDTFPYTGSTTVLNSLWMGVPTLTIAGDTLASRAGTT 688
Query: 838 ILGNLGLADRLLGEDVDDMVAKAVALAGDLEGLMRMRAGLRERLRASPLQDGPGFVADLE 897
+ ++GL D ++ + ++ VA+ VALA DL L +R GLRER AS A +
Sbjct: 689 WMSHVGLDDFVVA-NKEEFVARGVALASDLPALADIRTGLRERCAASAAFRPEVVAAGVS 747
Query: 898 GAYRAMWRRWCAGPP 912
A R MW+RWCAG P
Sbjct: 748 RALRIMWQRWCAGEP 762
Score = 43.5 bits (101), Expect = 5e-08
Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 38 RHPEDSAGLILFGLTRVALGRPLEAEQPLRRALALDPIDDPFHARAVCALVDVLKAQGRM 97
R P D G+ LGR EA PLR+A L P + +R V L D L+ +G
Sbjct: 208 RFPADGNSWRWLGIALHRLGRYDEALAPLRKAAELFP--EELESRTV--LADTLRLKGLP 263
Query: 98 AEVSEVLERAGDVAPMNAVFPRMLGAHYRALGQVGAAITAARRAVAVESADGENWRGLAA 157
AE + + + P A R+ G G+V + AARRA+ + + + L
Sbjct: 264 AETEQECRKILAINPDYAEAQRIFGMSLVHQGRVAEGLAAARRAIELAPNNSTAYSTLGV 323
Query: 158 TLL 160
LL
Sbjct: 324 LLL 326
Score = 40.0 bits (92), Expect = 6e-07
Identities = 83/372 (22%), Positives = 122/372 (32%), Gaps = 35/372 (9%)
Query: 59 PLEAEQPLRR--ALALDPIDDPFHARAVCALVDVLKAQGRMAEVSEVLERAGDVAPMNAV 116
PL EQ L + AL L D H +G + + D P +A
Sbjct: 12 PLTPEQQLEQDIALVLQTALDHHH-------------KGEFEDAHALYRAILDANPKHAD 58
Query: 117 FPRMLGAHYRALGQVGAAITAARRAVAVESADGENWRGLAATLL-GGAPGEALEALERAK 175
LG + A+ + + + +G+ W + L+ G A ALE +
Sbjct: 59 VLYNLGVLLGQTARTAEALPLFEQCLGLHPHNGQYWAAYISALIDAGETAAAWLALEMGQ 118
Query: 176 TCGDDGADWWNIRGVALAALGEGEAAREAFKNAILRDGAAPMAWTNLGNLEIRAARSADA 235
G G + G+ + G+ A + A P A T AA S
Sbjct: 119 KQGLKGPA---VDGLIVRMANPGKVIH-TLPVAAQKPQAEPAAATETPP----AAEST-- 168
Query: 236 LERAVEAYGQAIRRAPDSFEAHNNLAQALRDLGRRDEALVHAERAASLRPHDVTVLNTQA 295
R A G+ + + N AL + G EA+ A P D
Sbjct: 169 --RTTIASGRRVS------QQETNRYTALYNKGNVVEAVKLARSLTQRFPADGNSWRWLG 220
Query: 296 NILRGLRRVDEAVAILERALACDGRSAETHSNLGLALLAAQDRQRAEEHFRKAAALAPDC 355
L L R DEA+A L +A E+ + L L E+ RK A+ PD
Sbjct: 221 IALHRLGRYDEALAPLRKAAELFPEELESRTVLADTLRLKGLPAETEQECRKILAINPDY 280
Query: 356 VDIIVNLACFLIHINAGKEVLGVLEPALARFPGDVGLLATLGLHYFQENAYEDCATVFET 415
+ L+H E L A+ P + +TLG+ + F
Sbjct: 281 AEAQRIFGMSLVHQGRVAEGLAAARRAIELAPNNSTAYSTLGVLLLDLGFVSEAEKEFRA 340
Query: 416 VLAKKP-DHVEA 426
L K P DH+ A
Sbjct: 341 ALEKDPKDHIAA 352
Score = 38.1 bits (87), Expect = 2e-06
Identities = 38/126 (30%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 23 GEADHADVLLDLHLSRHPEDSAGLILFGLTRVALGRPLEAEQPLRRALALDPIDDPFHAR 82
G D A L PE+ + T G P E EQ R+ LA++P D A+
Sbjct: 227 GRYDEALAPLRKAAELFPEELESRTVLADTLRLKGLPAETEQECRKILAINP--DYAEAQ 284
Query: 83 AVCALVDVLKAQGRMAEVSEVLERAGDVAPMNAVFPRMLGAHYRALGQVGAAITAARRAV 142
+ + L QGR+AE RA ++AP N+ LG LG V A R A+
Sbjct: 285 RIFGM--SLVHQGRVAEGLAAARRAIELAPNNSTAYSTLGVLLLDLGFVSEAEKEFRAAL 342
Query: 143 AVESAD 148
+ D
Sbjct: 343 EKDPKD 348
Score = 33.5 bits (75), Expect = 6e-05
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 389 DVGLLATLGLHYFQENAYEDCATVFETVLAKKPDHVEARASLGVVRWSQGRLVESLAL 446
D+ L+ L + + +ED ++ +L P H + +LGV+ R E+L L
Sbjct: 22 DIALVLQTALDHHHKGEFEDAHALYRAILDANPKHADVLYNLGVLLGQTARTAEALPL 79
Score = 33.5 bits (75), Expect = 6e-05
Identities = 42/165 (25%), Positives = 59/165 (35%), Gaps = 5/165 (3%)
Query: 129 GQVGAAITAARRAVAVESADGENWRGLAATLLG-GAPGEALEALERAKTCGDDGADWWNI 187
G V A+ AR ADG +WR L L G EAL L +A + + +
Sbjct: 193 GNVVEAVKLARSLTQRFPADGNSWRWLGIALHRLGRYDEALAPLRKAAELFPEELESRTV 252
Query: 188 RGVALAALGEGEAAREAFKNAILRDGAAPMAWTNLGNLEIRAARSADALERAVEAYGQAI 247
L G + + + + A G + R A+ L A +AI
Sbjct: 253 LADTLRLKGLPAETEQECRKILAINPDYAEAQRIFGMSLVHQGRVAEGLAAA----RRAI 308
Query: 248 RRAPDSFEAHNNLAQALRDLGRRDEALVHAERAASLRPHDVTVLN 292
AP++ A++ L L DLG EA A P D N
Sbjct: 309 ELAPNNSTAYSTLGVLLLDLGFVSEAEKEFRAALEKDPKDHIAAN 353