Pairwise Alignments
Query, 585 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H
Subject, 1772 a.a., hypothetical protein from Azospirillum brasilense Sp245
Score = 157 bits (396), Expect = 5e-42
Identities = 163/585 (27%), Positives = 232/585 (39%), Gaps = 42/585 (7%)
Query: 3 PRLALALKLLEAGLVESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTRGL 62
P +A A+ AG ++ A AL+ PD P A HL G++ R GD A +
Sbjct: 612 PLVAEAVAGYRAGALKDAEDQCRAALDSVPDHPVALHLLGILRLRQGDAGEAAVVLALAV 671
Query: 63 AVAADDAPLRIERAGLLLDLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGRPGEA 122
D+A A GR + ALA A+ L PD + L + G EA
Sbjct: 672 KADPDNAAAHAALADACKAAGRHDSALAAQRNAVLLRPDAAEHWLNRTALLRERGAGDEA 731
Query: 123 LAPLRRARALAPDDVAPAHNLGRALLALDRPDEALPLLEAAVARAPGAIDPRADLAEALR 182
A RRA + P +LG L + A A+A P +D +L
Sbjct: 732 EACARRALRIRPSLGVAHTHLGHLLAEREDRAGAERSHRRALALTPSEVDALVNLGALRL 791
Query: 183 RLDRPGDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGAGW 242
R D+P +A +LLR AP A AL G V+++ A ++ +AP
Sbjct: 792 RADQPAEAERLLRRATVTAPHAAIAWSHRGSALDRLGRVEKAFACHSRAVGRAPEMAEAQ 851
Query: 243 VNLAAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRWRT 302
NLA EA AA A+ ++P A N + + G+A++ R+ T
Sbjct: 852 ANLAMHWARRQRPAEAIAAYREAIRINPALPTAHYNLSLLLLEQGELRSGWAEHDWRFDT 911
Query: 303 AAFQRPYPPVTAPPWAGEPLGEGTLLVRGEQGLGDQIMAARFLPWLSKRPDRPRRIVFEC 362
F+ PW GE + LLV EQG+GD+I+ A P L +R +V EC
Sbjct: 912 PQFRDQKRRFAVRPWRGENIASARLLVWREQGVGDEILFASCYPDLLRRAG---HLVVEC 968
Query: 363 HPCLHRLLAEGLEAGIDLLAMGRPPPPVAAWIGALDLARMAGVTAGVMPVDVPYLKARP- 421
L L A L G + P V + A L R+ P P+L P
Sbjct: 969 DRRLVSLFARSL-PGATVRPPTVEPRDVDVQVAAASLPRLLRSDWKRFPAQ-PWLVPEPG 1026
Query: 422 -------PVPPLAPPLPPGGRGRLGLVWAGKTRPRDRSC---PLEPLAGLCVDQGWTVHA 471
+ L P L ++G+ W + +R L+ LA L G
Sbjct: 1027 RLDRWRNRLAALGPGL------KVGIAWRSQIMDGERRAAYVTLDALAPLFAVPGVVFVN 1080
Query: 472 LQLGPRRADLAGLPAGLGVI----DEGDRLGDMAATASVMAGLDLVVAVDTAVAHLAGAL 527
LQ G A++A A GV D+ + D A++ A LDLV+ + LAGAL
Sbjct: 1081 LQYGDCAAEIAAAEARFGVTIHRWDDLNLKDDFEGAAALTANLDLVLTPAVSSGELAGAL 1140
Query: 528 GLPCALLLLATPDWRWGQK------ASRTVWYPSLRLFRQPHPGD 566
G+P WR+G + W+PS+RLF QP PG+
Sbjct: 1141 GVPV---------WRFGHRDWTQLGTGVRPWFPSMRLF-QPRPGE 1175
Score = 145 bits (366), Expect = 1e-38
Identities = 176/602 (29%), Positives = 239/602 (39%), Gaps = 83/602 (13%)
Query: 42 GLIARRGGDGALALAAFTRGLAVAAD---DAPLRIERAGLLLDLGRAEEALADLAVALAL 98
G + GD A A+A AV AD DA L L GR EA+A AL
Sbjct: 6 GTLLNERGDFAEAVAVLAP--AVDADTGRDARLLFHLGSALQGDGRLAEAVARYREALLQ 63
Query: 99 APDHQAVLSTQGRALIDLGRPGEALAPLRRARALAPDDVAPAHNLGRALLALDRPDEALP 158
P + G AL+DLG A+ LR AL P D +NLG L ++RP+ A
Sbjct: 64 DPLLAGAWNNLGVALLDLGDHAAAVRVLRTCIALRPTDAVAFNNLGTGLDGVERPEAAAG 123
Query: 159 LLEAAVARAPG------------AIDPRADLAEALRRL------DRPGD----------- 189
+ ++ P + RA+ AEAL R D P
Sbjct: 124 VFRRSLIIQPDYGKALNNLGNSRRVARRAEAAEALYRRALIVQPDYPDSYTNLGNVLKDW 183
Query: 190 -----AAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGAGWVN 244
A +L R + AP A L AL G +E+ A R +L P H + N
Sbjct: 184 DDWQGALRLHRRAVRLAPRSAIARTTLGLALNVLGRNEEAEAAHRRALSIDPGHAEAYAN 243
Query: 245 LAAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRWRTAA 304
L ++ + EA RAL +DP A A++N A + + +G+ Y R+R A
Sbjct: 244 LGMLQWQSTRVAEAERTLRRALRIDPTLAAARLNFALVSLASGNLSEGWEAYQDRFR--A 301
Query: 305 FQRPYPPVTAPPWAGEPLGEGTLLVRGEQGLGDQIMAARFLPWLSKR--PDRPRRIVFEC 362
P + AP W + LLV EQG+GD++M A P L+ R R ++V EC
Sbjct: 302 KGHPERTIGAPLWRDDAATVRRLLVWREQGVGDEMMFASCYPALADRVAAGRIGQVVLEC 361
Query: 363 HPCLHRLLAEGLEAGIDLLAMGRPPPPVAAWIGALDLARMAG---VTAGVMP-VDVPYLK 418
P L L + AA G L G + AG +P + P L
Sbjct: 362 DPRLVSLFSRS-------FPWATVRGEAAAPHGTETLVSPDGDAHIAAGALPRLLRPDLA 414
Query: 419 ARPPVPPLAPP-------------LPPGGRGRLGLVWAGKTRPRDRSC---PLEPLAGLC 462
+ PP P L P L PG ++G W + +R LE L
Sbjct: 415 SFPPRPWLVPDPERLAVWRERLAILGPG--LKIGFAWRSQLMTTERKAAYITLEAFEPLF 472
Query: 463 VDQGWTVHALQLGPRRADLAGLPAGLGVI----DEGDRLGDMAATASVMAGLDLVVAVDT 518
G + LQ G A++A A GV + + D A++ A LDLV+A
Sbjct: 473 AVPGVVLVNLQYGDCEAEIAAAEARFGVTIHRWSDLNLKDDFEGAAALTASLDLVIAPAV 532
Query: 519 AVAHLAGALGLPCALLLLATPDWRWGQKASRTVWYPSLRLFRQPHPGDWDGAFDAVRRAF 578
+ LAGALG+P + DW R WYP++RLF QP PG+ DAV
Sbjct: 533 STGELAGALGVPA--WRIGARDWTQLGTGVRP-WYPTMRLF-QPRPGE---TLDAVMARI 585
Query: 579 AQ 580
AQ
Sbjct: 586 AQ 587
Score = 137 bits (344), Expect = 5e-36
Identities = 162/556 (29%), Positives = 211/556 (37%), Gaps = 41/556 (7%)
Query: 50 DGALALAA--FTRGLAVAADDAPLRIERAGLLL-DLGRAEEALADLAVALALAPDHQAVL 106
DG LA AA + R L AD P+ + +GLL G + +A AL P + A
Sbjct: 1221 DGRLAEAAPLYERVLTARADH-PVALHLSGLLAHQSGDSAAGAGRIARALDALPAYGAAQ 1279
Query: 107 STQGRALIDLGRPGEALAPLRRARALAPDDVAPAHNLGRALLALDRPDEALPLLEAAVAR 166
S+ G L+ LGR EA+ R A AL P A NLG AL A+ A A
Sbjct: 1280 SSLGTVLMALGRAPEAVRRFRLALALQPGAAAALTNLGNALEAVHDLRAAAQAHRRATLA 1339
Query: 167 APGAIDPRADLAEALRRLDRPGDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVA 226
P + + L RL A + R L AP R D L AL AG +DE+
Sbjct: 1340 DPTLAEAHDNWGAVLTRLGALEAAEERHRHALRLAPEREDGWLNLGVALRRAGRLDEARR 1399
Query: 227 VLRASLDKAPTHGAGWVNLAAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLA 286
L +L AP G NL L + G A RAL ++P A N
Sbjct: 1400 TLVRALALAPAQGDALANLGRLLRDRGETAAAERWCRRALRVEPGHPAAAFNLGLLDLAR 1459
Query: 287 DDYEQGFADYAHRWRTAAFQRPYPPVTAPPWAGEPLGEGTLLVRGEQGLGDQIMAARFLP 346
E G+A Y R+R V P W GE LLV EQG+GD+I+ A L
Sbjct: 1460 GRLEAGWAGYDARFRARELSGAARAVAVPAWEGEDPAGLRLLVWAEQGIGDEILFAGCLD 1519
Query: 347 WLSKRPDRPRRIVFECHPCLHRLLAEGLEAGIDLLAMGRPPPPVAA---WIGALDLARMA 403
L R +V EC L L A A P P A + L R
Sbjct: 1520 DLIA---RAAAVVVECDRRLVPLFARSFPRAEWRPAPADPEAPCAGIDRHVAMGSLPRWL 1576
Query: 404 GVTAGVMPVDVPYLKARPP--------VPPLAPPLPPGGRGRLGLVWAGKTRPRDRSCPL 455
P +L A P V L L G R GL+ A + R PL
Sbjct: 1577 RPRFDRFPSRPSFLTADPERAAQWRERVDALGSGLKVGIAWRSGLMTAER---RGAYAPL 1633
Query: 456 EPLAGLCVDQGWTVHALQLGPRRADLAGLPAGLGVI----DEGDRLGDMAATASVMAGLD 511
+ + G LQ G A++A GV + D D+ A++M LD
Sbjct: 1634 DAWGPVFAVPGAIFVTLQYGDCAAEIAEAERRFGVTIHRWGDLDLKDDLDGVAALMTALD 1693
Query: 512 LVVAVDTAVAHLAGALGLPCALLLLATPDWRWGQKASRTV-------WYPSLRLFRQPHP 564
LV+ ++V LAG LG+P WR+G + T W+P++ L P
Sbjct: 1694 LVITPASSVGELAGGLGVPV---------WRFGLQGDWTALGTGARPWFPTMALITAPPG 1744
Query: 565 GDWDGAFDAVRRAFAQ 580
GA + R A+
Sbjct: 1745 QPASGALPTIARRLAE 1760
Score = 40.4 bits (93), Expect = 6e-07
Identities = 54/183 (29%), Positives = 70/183 (38%), Gaps = 5/183 (2%)
Query: 1 MNPRLALALKLLEAGL-----VESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALAL 55
+ P A+A L GL E+AA ++L PD +A + G R A
Sbjct: 97 LRPTDAVAFNNLGTGLDGVERPEAAAGVFRRSLIIQPDYGKALNNLGNSRRVARRAEAAE 156
Query: 56 AAFTRGLAVAADDAPLRIERAGLLLDLGRAEEALADLAVALALAPDHQAVLSTQGRALID 115
A + R L V D +L D + AL A+ LAP +T G AL
Sbjct: 157 ALYRRALIVQPDYPDSYTNLGNVLKDWDDWQGALRLHRRAVRLAPRSAIARTTLGLALNV 216
Query: 116 LGRPGEALAPLRRARALAPDDVAPAHNLGRALLALDRPDEALPLLEAAVARAPGAIDPRA 175
LGR EA A RRA ++ P NLG R EA L A+ P R
Sbjct: 217 LGRNEEAEAAHRRALSIDPGHAEAYANLGMLQWQSTRVAEAERTLRRALRIDPTLAAARL 276
Query: 176 DLA 178
+ A
Sbjct: 277 NFA 279
Score = 39.3 bits (90), Expect = 1e-06
Identities = 40/132 (30%), Positives = 52/132 (39%)
Query: 18 ESAAIPVAQALERDPDDPRAHHLAGLIARRGGDGALALAAFTRGLAVAADDAPLRIERAG 77
E+A +AL PD P ++ G + + D AL R + +A A R
Sbjct: 153 EAAEALYRRALIVQPDYPDSYTNLGNVLKDWDDWQGALRLHRRAVRLAPRSAIARTTLGL 212
Query: 78 LLLDLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGRPGEALAPLRRARALAPDDV 137
L LGR EEA A AL++ P H + G R EA LRRA + P
Sbjct: 213 ALNVLGRNEEAEAAHRRALSIDPGHAEAYANLGMLQWQSTRVAEAERTLRRALRIDPTLA 272
Query: 138 APAHNLGRALLA 149
A N LA
Sbjct: 273 AARLNFALVSLA 284