Pairwise Alignments

Query, 585 a.a., hypothetical protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 517 a.a., Tetratricopeptide (TPR) repeat from Paraburkholderia bryophila 376MFSha3.1

 Score =  141 bits (356), Expect = 6e-38
 Identities = 138/479 (28%), Positives = 199/479 (41%), Gaps = 39/479 (8%)

Query: 130 RALAPDDVAPAHNLGRALLALDRPDEALPLLEAAVARAPGAIDPRADLAEALR----RLD 185
           R +  D    A    R L+AL +  + LPL +  + RA   ++P+    + L     RL 
Sbjct: 37  RIIVHDSAHAAALYSRGLVALAQ--DQLPLAQRWIERAV-EVEPQPPFFDMLCLVQIRLR 93

Query: 186 RPGDAAQLLRAVLADAPGRADLADALAGALLAAGAVDESVAVLRASLDKAPTHGAGWVNL 245
                     A L   P    L   L  AL   G  +E+ AV R  ++  P +     NL
Sbjct: 94  AFASIVHTASAGLTYQPDSLSLHYYLGVALQLQGRAEEAAAVYRRLIELKPDYVQAHANL 153

Query: 246 AAALIETGALDEATAAADRALALDPDDADAKVNRAFARCLADDYEQGFADYAHRWRTAAF 305
              + + G+L +A      A+ LDP +  A+ + +     A  YE+ +  +  RW     
Sbjct: 154 GIVVKDLGSLSKAEQHLRHAMTLDPSNRGARASLSQVLLAAGRYEEAWPYFEDRWANFVD 213

Query: 306 QRPYP-----PVTAPPWAGEP---LGEGTLLVRGEQGLGDQIMAARFLPWLSKRPDRPRR 357
               P      +  P W GE     G   LLV  EQG GD +   R+LP      +R  +
Sbjct: 214 ADGQPVSQRSELPWPQWKGEDSGVAGGARLLVLPEQGHGDSLQFVRYLPLAL---ERFAQ 270

Query: 358 IVFECHPCLHRLLAEGLEA---GIDLLAMGRPPPPVAAW-IGALDLARMAGVTAGVMPVD 413
           + + C P L RL  E L     G+ +L    P      W    + L    G     +P +
Sbjct: 271 VGYICPPSLRRLYEESLCVRWPGLVMLDDVMPDAKEWDWQCPLMSLPLAFGTRLDNIPAE 330

Query: 414 VPYLKARPP--------VPPLAPPLPPGGRGRLGLVWAGK----TRPRDRSCPLEPLAGL 461
            PYL+A P         +  L+ P  P    R+G+VWAG     T  R RS      A L
Sbjct: 331 -PYLRAEPQRSAEWRAKLGELSRPDLP----RVGVVWAGGHSGLTEDRARSLTSAQFAPL 385

Query: 462 CVDQGWTVHALQLGPRRADLAGLPAGLGVIDEGDRLGDMAATASVMAGLDLVVAVDTAVA 521
                    +LQ     A  A       + D  D + D A TA+++  LDLV++VDT+VA
Sbjct: 386 LSLSRIRWISLQKADDLAKRASPSTKAYLTDWMDGVSDFADTAAIIDNLDLVISVDTSVA 445

Query: 522 HLAGALGLPCALLLLATPDWRWGQKASRTVWYPSLRLFRQPHPGDWDGAFDAVRRAFAQ 580
           HLA A+G P  LL      WRW +    + WYP++R+F QP  G+WD   + V     Q
Sbjct: 446 HLAAAMGKPVWLLNRFAGCWRWLRNRDDSPWYPTVRIFTQPQRGNWDEVIERVAAQLKQ 504



 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 51/163 (31%), Positives = 68/163 (41%), Gaps = 8/163 (4%)

Query: 6   ALALKLLEAGLVESAA--IPVAQ-----ALERDPDDPRAHHLAGLIARRGGDGALALAAF 58
           A A  L   GLV  A   +P+AQ     A+E +P  P    L  +  R     ++   A 
Sbjct: 44  AHAAALYSRGLVALAQDQLPLAQRWIERAVEVEPQPPFFDMLCLVQIRLRAFASIVHTA- 102

Query: 59  TRGLAVAADDAPLRIERAGLLLDLGRAEEALADLAVALALAPDHQAVLSTQGRALIDLGR 118
           + GL    D   L       L   GRAEEA A     + L PD+    +  G  + DLG 
Sbjct: 103 SAGLTYQPDSLSLHYYLGVALQLQGRAEEAAAVYRRLIELKPDYVQAHANLGIVVKDLGS 162

Query: 119 PGEALAPLRRARALAPDDVAPAHNLGRALLALDRPDEALPLLE 161
             +A   LR A  L P +     +L + LLA  R +EA P  E
Sbjct: 163 LSKAEQHLRHAMTLDPSNRGARASLSQVLLAAGRYEEAWPYFE 205