Pairwise Alignments

Query, 360 a.a., Flageller protein FlgA (NCBI) from Rhodospirillum rubrum S1H

Subject, 260 a.a., flagellar basal body P-ring formation protein FlgA from Rahnella sp. WP5

 Score = 47.0 bits (110), Expect = 6e-10
 Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 27/230 (11%)

Query: 138 GSTVPAERIQEALRVMLNGLGASPDTEIQVTST--------------QTPLTVPLGASPS 183
           G+T  A    ++L V +  + AS +++  ++S               Q  + V   A+  
Sbjct: 36  GATSGAVSYAQSLPVQVKSVPASSNSDTLLSSQIQQFFRQQYAESGMQVTVVVNTPAARQ 95

Query: 184 IRTLEEQF--DPSS---GRFSAVLEAPAGEADAE-RVRISGRLYETREIPVLSRRVGRDE 237
            + L  QF   P+S   G  S  +     ++  + +V++SG  +      V ++ V    
Sbjct: 96  PQCLSPQFMLSPNSRTWGNVSVAVNCNGKKSYVQTKVQVSGTYW------VAAKNVPAGA 149

Query: 238 IIGPRDVSFLRERLDRLPPDAITDAADLVGMAPRVAVRDGQPLRRADVVRPTLLKKGALV 297
            +   D+     RLD LPP  I D+   V       +  GQPL  + + RP ++  G  V
Sbjct: 150 HLTQTDMQQKTGRLDLLPPKTILDSQQAVNGITLRNISIGQPLTLSMLRRPWMVHAGQEV 209

Query: 298 TMELRMPGIAVSAQGRALDSGAEGDTVRVINTASNQTILATVSGGNRVIV 347
            ++    G  VS+ G+A+++ A  ++VR I   S   +  TV     V V
Sbjct: 210 QVQATGSGFNVSSAGKAMNNAAANESVR-IRMPSGAIVNGTVGSDGSVTV 258