Pairwise Alignments

Query, 253 a.a., Flagellar biosynthesis protein FliR (NCBI) from Rhodospirillum rubrum S1H

Subject, 260 a.a., flagellar type III secretion system protein FliR from Vibrio cholerae E7946 ATCC 55056

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 60/232 (25%), Positives = 105/232 (45%), Gaps = 12/232 (5%)

Query: 17  FVRLGTAMLVLPGLSSTYVSVNIRILLAVTITLVALPTVGAALPPAPDNTAFLVL----L 72
           + R+   ++V+    + +V   +R+ L + +T   +P    A+P  P + A L L    +
Sbjct: 19  YTRIAAMLMVMTVTGARFVPARVRLYLGLALTFAVMP----AIPAVPSDIALLSLQGFMI 74

Query: 73  IAVEATIGVFLGMMAQFLLVPVSFAGNIMGFSTGLMMAQAFDPTTAQQSALIAGFLGEVA 132
              +  IGV +GM+ QFL+      G I+G  + L  A   DP   Q + L+      +A
Sbjct: 75  TFEQIVIGVAMGMVTQFLVQIFVMLGQILGMQSSLGFASMVDPANGQNTPLLGQLFMLLA 134

Query: 133 MVMVFVTGMHHLMIEAVVNSYDAFPPGQMPDTGDMVQLLVTILSSGFRLGLQLAAPFIIY 192
            +   V+  H  MI+ VV S+ + P G    T    + L   L   F+  L ++   II 
Sbjct: 135 TLFFLVSDGHLKMIQLVVFSFKSLPIGSGSLTTVDFRELALWLGIMFKASLAVSLSGIIA 194

Query: 193 AIIFNATLGVIARLMPQLNVLFVAMPAQILFGLALLMTTVPFLIYSFLGHFE 244
            +  N + GV+ R  PQLN+  +     +L GL L      ++++    H++
Sbjct: 195 LLTVNLSFGVMTRAAPQLNIFSLGFSFALLVGLLLCW----YIVHGLYTHYD 242