Pairwise Alignments

Query, 429 a.a., Protein of unknown function DUF214 (NCBI) from Rhodospirillum rubrum S1H

Subject, 419 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 87/378 (23%), Positives = 150/378 (39%), Gaps = 75/378 (19%)

Query: 14  RKRKILAAVTVALAATLITTLFTISLDVGDKM----AREMKSYGSNIR-VVPKSEAVPLR 68
           R+R +L+   +A+A   +T+     L   D +    AR++     + R    + E  PL 
Sbjct: 20  RRRSLLSISIIAIAVLALTSAGGFGLYTYDSLRESTARDVGHLTLSQRGYFAQEEETPLA 79

Query: 69  IGGVDYNPLKGRDYLDEADL--PKMKDIFWRNNIVGLAPTLRTP---VRLG-EEKAVSLI 122
                 N L+G D++ +  L  P ++ I  R  + GL    +     V LG ++K   + 
Sbjct: 80  ------NGLEGSDHIRQVLLANPAIRGIQPRIELTGLVSNGQKSTIFVGLGVDDKEFDMK 133

Query: 123 GTYFD----KPMPLPDDPDYRTGVRQTSGFWSVDGAWPQDDASDQALVGVTLAGRLGLTK 178
           G + D    + +  P  P +                   D    Q ++GV LA  L +  
Sbjct: 134 GPFLDLRAGQTLQDPKSPRF-------------------DPTQPQVMLGVDLARNLSVGV 174

Query: 179 GATVSVVDEATG---TSRSFTVSGLLTTGGVEDDA--VVVPLAVVQEMAGLAGKVAEVEI 233
           G  V+++         +  F V GL +TG  E D   + + LA  QE+   + KV+ + +
Sbjct: 175 GDWVTLLATTADGALNALDFQVRGLYSTGVPELDKRQLYLHLASAQELLN-SSKVSTLSV 233

Query: 234 SALTIPENE-LSTKARRDTEKLSTAE---YDTWYCTAYVSSIAHQIEEAVVNASARPIWQ 289
                   + L T       +LS ++      W   A+  +    + + +          
Sbjct: 234 YLFNTENTQTLQTWVENQLNQLSLSQELQVTPWQQLAFFYTRVKDLYDRLFG-------- 285

Query: 290 VAAGEGAVIGKIQALLLVVGLAAFVSAAMGVSSMMNTTITERAREIGLMKALGAAGGEIY 349
                  V+G + A+++ V L  F +  M VS        ER REIG + ALGA   +I 
Sbjct: 286 -------VMGTVMAMVVFVAL--FNTLTMSVS--------ERTREIGTLSALGAYPSDIL 328

Query: 350 LLFLGEAVIVGGIGGLVG 367
             F+ EA ++   G L+G
Sbjct: 329 AGFVREATLLALCGSLLG 346