Pairwise Alignments

Query, 429 a.a., Protein of unknown function DUF214 (NCBI) from Rhodospirillum rubrum S1H

Subject, 403 a.a., ABC-type antimicrobial peptide transport system, permease component from Dechlorosoma suillum PS

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 104/447 (23%), Positives = 176/447 (39%), Gaps = 69/447 (15%)

Query: 1   MFFHMLRQSFLEGRK---RKILAAVTVALAATLITTLFTISLDVGDKMAREMKSYGSNIR 57
           MF + +  +  E R+   R  L  + + +    + T+ T+       +A ++ S GSN+ 
Sbjct: 1   MFLNAILLALREIRRNLMRSFLTVLGIVIGVAAVITMVTLGNGATRMVAEQISSLGSNLL 60

Query: 58  VV-PKSEAVPLR--IGGVDYNPLKGRDYLDEADLPKMKDIFWRNNIVGLAPTLRTPVRL- 113
           ++ P     P R   G  ++        L +  +P +K +         AP + + V L 
Sbjct: 61  ILRPGQRLGPGRDSAGAPNFRAADVEALLTQ--VPSLKAV---------APVVSSTVTLV 109

Query: 114 --GEEKAVSLIGTYFDKPMPLPDDPDYRTGVRQTSGFWSVDGAWPQDDASDQALVGVTLA 171
              E  + S+ G+               T     +G W +       D   +A   V + 
Sbjct: 110 AGAENWSSSVTGS---------------TNAYFVAGNWKLAAGRQFSDEEMRAGKAVCVI 154

Query: 172 GRLGLTK-GATVSVVDEATGTSR-SFTVSGLLTTGGV------EDDAVVVPLAVVQEMAG 223
           G     K  A  S +  A      S  + G+L + G       +DD V++PL   Q    
Sbjct: 155 GNTVKQKLFAGQSPLGNAVRVKNFSCEIVGILASKGQGAMGMDQDDVVLMPLVTAQRR-- 212

Query: 224 LAGKVAEVEISALTIPENELSTKARRDTEKLSTAEYDTWYCTAYVSSIAHQIEEAVVNAS 283
           L GK  +V    L++ +   S +      +L                +A   ++   N +
Sbjct: 213 LTGKTQDVSTLMLSLKDGASSPRVMEQIRQLMRER----------RKLAENDDD---NFN 259

Query: 284 ARPIWQVAAGEGAVIGKIQALLLVVGLAAFVSAAMGVSSMMNTTITERAREIGLMKALGA 343
                Q+A      IG +  LL  V   + +   +G+ ++M  ++TER REIG+  A+GA
Sbjct: 260 LMDTKQIAEALSGTIGTMTTLLGAVAAVSLLVGGIGIMNIMLVSVTERTREIGIRLAIGA 319

Query: 344 AGGEIYLLFLGEAVIVGGIGGLVGWGLG----LGLAQGVGL-MVFGSTVTIAWVSGPLVV 398
              E+ L FL EAV +   GGLVG  L     LGL+  +G+  +F   + +      L  
Sbjct: 320 LENEVLLQFLIEAVALSAFGGLVGIILALLACLGLSALMGMPFLFNPGINL------LAF 373

Query: 399 LVSIAMALAGSALPARAITALMPVEVL 425
             S A+ +    +PAR    L P+E L
Sbjct: 374 GFSAAIGVIFGYVPARRAAGLDPIEAL 400