Pairwise Alignments

Query, 393 a.a., Protein of unknown function DUF1006 (NCBI) from Rhodospirillum rubrum S1H

Subject, 408 a.a., Uncharacterized protein conserved in bacteria from Phaeobacter inhibens DSM 17395

 Score =  192 bits (487), Expect = 2e-53
 Identities = 135/358 (37%), Positives = 193/358 (53%), Gaps = 29/358 (8%)

Query: 4   RALSALEARRIALRAQGFGRARPPTPSPRHLDAVTRRLGLVQMDSINVLARAHAMPAFSR 63
           RA   L   R AL  Q  G    P      L+ +TR LG VQ+DSIN +ARAH M  FSR
Sbjct: 9   RAARRLFMDRHALLEQPSG----PAKGDALLELITR-LGFVQLDSINTVARAHDMILFSR 63

Query: 64  LGPYDKALLETASYDPRRRTLFEYWGHEASLIRLELQPA--LRWRMEDARAGLGLYSGLA 121
              Y  A L+   Y+ + R+LFE+W H+A+++ +E  P   LR+R  DA      Y    
Sbjct: 64  RPSYRPAALKRL-YE-QDRSLFEHWTHDAAVLPMEFYPHWHLRFR-RDAEVLRKRYRNWH 120

Query: 122 RFAVERRAVIDGVLAALAAHGPASARDLDPGQKRN-GAWWGWGETKAALEWLFWGGLVTT 180
           R   E  A    VL  +  HG  S+ D+   +K+  G WW W  +K ALE+L+  G +  
Sbjct: 121 RDGYE--AKFQHVLDHIRDHGAVSSSDVGKDEKKGTGGWWDWHPSKTALEYLWRSGALAV 178

Query: 181 LRRRGFERVYDLTERALPASVLA-RPTPPRAEALRILVTQAASALGVATASDLRLYFRLP 239
           + R GF++ YDL+ER + A  L+ + +P   E L  L   A   LG AT+ +L  ++   
Sbjct: 179 VGRSGFQKRYDLSERVIDARHLSVQGSPKPEETLDWLCNAALDRLGFATSGELAAFWATA 238

Query: 240 A-TDANRAIAELVEEGTLQPVAV-----------AGWGQPAYLSADPPSSGPLRAQAIVS 287
           + T+      + + +G ++P+ +           A  G     +A PP  G +R   ++S
Sbjct: 239 SPTECAAWCKQALADGRIEPLDITLADGRSRRVFARPGAVEQAAALPPPPGRMR---LLS 295

Query: 288 PFDPLLFERARVERLFGFTYRIEIYVPAAKRQYGYYTLPLLLGDTLVGRVDLRAERKA 345
           PFDP L +R R E LFGF YRIE++ PAAKR+YGYY  PL+ GD LVGR+D++A R+A
Sbjct: 296 PFDPALRDRKRAEGLFGFHYRIEVFTPAAKRRYGYYVFPLMEGDRLVGRIDMKAHRQA 353