Pairwise Alignments

Query, 313 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 310 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  201 bits (512), Expect = 1e-56
 Identities = 118/309 (38%), Positives = 166/309 (53%), Gaps = 2/309 (0%)

Query: 2   DLLDLLLSAGLWATVLRIATPLIFGTLGELLCERAGVLNLGIEGIMTLGALVGWLSVYQG 61
           D+  L   A   A   R+A PL+F ++GE+  ERAGVLN+G+EG+M  GA  G+ + +  
Sbjct: 3   DVASLSFLAATIAASWRLAAPLMFASIGEVFSERAGVLNIGLEGVMLAGAFAGFAAAFTS 62

Query: 62  CDLWTGVMLAACAGMAAGLLQGLLTVPLGLSQHVTGIGVTLLCTSLSYYVYRLALPQTTT 121
             +  GV  A  AG+  GLL    T+ +   Q V G  + LL   L+ +++R        
Sbjct: 63  GSILLGVAAAVAAGVLVGLLFAFFTITIKADQIVVGAAINLLGLGLTAFLFRAYFSSAGK 122

Query: 122 PPSIAPFAPFGDGALADLPVIGGVLAQQTPLTMVALCAVVAIAWLLYRTPLGLAIRMVGE 181
              IA   P     L+DLP  G    +Q       L       ++LYRT  GL +R VGE
Sbjct: 123 GIEIAK--PVDLPWLSDLPFFGEAFFRQNAFVYSTLPVAALAVFVLYRTSFGLTLRAVGE 180

Query: 182 NPAAADAQGISVTAVRMGAVMAGSALMAVGGAFLTLSAFNAFFFNMIGGRGWICIALVVF 241
           +P A D  G SV   R GAV+  SAL A+GGAFLTL+  N F   +  GRG+I +A+VVF
Sbjct: 181 HPKAVDVSGRSVALYRYGAVLICSALAALGGAFLTLAHSNQFVEGISSGRGFIALAVVVF 240

Query: 242 ASWRPGKALFGALLFALFDALQTRLQQGGDSGIPYQVYLMAPYVLSIVALVVMSRRAAYP 301
           A W P  A   +LLF +F ALQ +LQ      +PYQ++   PYV++I AL+++  R   P
Sbjct: 241 ARWSPIGAFIVSLLFGVFYALQLQLQAQPVLFLPYQLFQALPYVMTIAALILVRNRVDTP 300

Query: 302 QALMIPFRK 310
             L + ++K
Sbjct: 301 SMLGVAYKK 309