Pairwise Alignments

Query, 313 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 306 a.a., branched chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  202 bits (513), Expect = 1e-56
 Identities = 118/285 (41%), Positives = 171/285 (60%), Gaps = 8/285 (2%)

Query: 14  ATVLRIATPLIFGTLGELLCERAGVLNLGIEGIMTLGALVGWLSVYQGCDLWTGVMLAAC 73
           A  ++  TP+++ TLGE+L ERAGVLNLG+EG+M +G    +L+++   D W  V++AA 
Sbjct: 11  AAAVQCGTPILYATLGEMLTERAGVLNLGVEGMMIIGTFTAFLALHLTGDPWIAVVVAAL 70

Query: 74  AGMAAGLLQGLLTVPLGLSQHVTGIGVTLLCTSLSYYVYRLALPQTTTPPSIAPFAPFGD 133
            G A GL+ G++ +    +Q V+G+ +T+    L+ Y+    +   TT      F PF  
Sbjct: 71  CGGALGLVHGIVCLVFQGNQVVSGLALTIFGVGLADYLGTPFVGTVTTG-----FTPFSL 125

Query: 134 GALADLPVIGGVLAQQTPLTMVALCAVVAIAWL-LYRTPLGLAIRMVGENPAAADAQGIS 192
             L D+PV+G V  +   L  ++   +  + WL L RT  GLA+R  GE+PAAA A GI+
Sbjct: 126 PVLGDIPVLGEVFFRHDALVNLSY-VLPPLFWLFLARTRWGLALRATGEHPAAAAAAGIN 184

Query: 193 VTAVRMGAVMAGSALMAVGGAFLTLSAFNAFFFNMIGGRGWICIALVVFASWRPGKALFG 252
              VR  A+ AG AL+ +GGA+L+L+  + +  NM  GRGWI +ALV+FA WRPG+A+ G
Sbjct: 185 PVLVRWAALFAGGALVGIGGAYLSLAYTHLWTNNMTAGRGWIAVALVIFAFWRPGRAVLG 244

Query: 253 ALLFALFDALQTRLQQGGDSGIPYQVYLMAPYVLSIVALVVMSRR 297
           A LF    A Q RLQ  G S +P  + LM PY L+I  L+  S R
Sbjct: 245 AYLFGGVMAFQLRLQAMGAS-VPSSLLLMLPYALTIGVLLFSSAR 288