Pairwise Alignments

Query, 313 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 329 a.a., sugar ABC transporter permease from Burkholderia phytofirmans PsJN

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 16/208 (7%)

Query: 5   DLLLSAGLWATVLRIATPLIFGTLGELLCERAGVLNLGIEGIMTLGALVGWLSVYQGCDL 64
           D LL+      + +   P+     GE++    G ++L    +      + + ++  G   
Sbjct: 43  DFLLTGASLQNLSQFIAPVAIIAFGEIMLMIGGEIDLSAGMVFAFAPFIMYFAIEAGLPP 102

Query: 65  WTGVMLAACAGMAAGLLQGLLTVPLGLSQHVTGIGVTLLCTSLSYYVYRLALPQTTTPPS 124
           W G++    A    GL+ G +TV L +   VT +G       L+  + R       +PP 
Sbjct: 103 WLGMLAGVVAAGIVGLINGAVTVYLRIPSFVTTLGTLFFVNGLTLTISR---GTPVSPPE 159

Query: 125 IAPFAPFGDGALADLPVIGGVLAQQTPLTMVALCAVVAIAWLLYRTPLGLAIRMVGENPA 184
            + FA F          +GG    +   T+ AL A + +  LL  T  GL     G NP 
Sbjct: 160 NSAFAAF----------MGGWGYSEIIWTL-ALAAFMHV--LLRHTRWGLHTIASGANPL 206

Query: 185 AADAQGISVTAVRMGAVMAGSALMAVGG 212
            A   GI V  +++G  +  + L  + G
Sbjct: 207 GASEAGIQVRRLKLGNFILAALLAGLTG 234