Pairwise Alignments

Query, 349 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 337 a.a., galactose/methyl galactoside ABC transporter permease MglC from Vibrio cholerae E7946 ATCC 55056

 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 62/276 (22%), Positives = 115/276 (41%), Gaps = 13/276 (4%)

Query: 40  VLKAFATLFTGGFGSRFAIGETLTRATPLILTGLAAAVAFRAKLWNIGAEGQLYLGALAA 99
           +L A   +    F S   +   LT+++  ++  L  A     +  ++ A  Q+ L A+ +
Sbjct: 25  ILLAIIVIQEPSFLSLRNLSNILTQSSVRVIIALGVAGLIVTQGTDLSAGRQVGLAAVIS 84

Query: 100 VAL----GSGPLALPAWALLPV--VMLGAALAGGLALLGPALLKTRFGVDEVVTTLLLNF 153
             L     +     P+   +P+  V++   L G +  L   ++     V   + TL    
Sbjct: 85  ATLLQSMDNVNKVFPSLGEIPILAVIISVCLIGAIIGLVNGVIVAYLKVTPFIATLGTMI 144

Query: 154 IVLLFVSMMLEGPMKDPMAMGWPQSAAMLPEAELPRLVARSRIHAGLLIAVALAGLVWLL 213
           IV    S+  +     P+A G+ +      +  +   +   R       A+     +W+L
Sbjct: 145 IVYGINSLYYDSVGASPIA-GFDERFTTFTQGFIR--IGDFRFSYITFYAIIAIIFMWVL 201

Query: 214 KSRTIWGFEMRALGANPRAAAFAGVPVGKVVLRVALLSGGLAGLAGACEVAGRAGYLTLD 273
            ++T++G  + A+G NP AA  +GV V   +L+V  LSG      G  E AGR G  T +
Sbjct: 202 WNKTVFGKNIFAVGGNPEAAKVSGVNVPLTLLKVYALSGVFYAFGGMLE-AGRIGSATNN 260

Query: 274 MSPGYGYSGIVIAMLAQLNPLGVIAAAVMVAGVFVG 309
           +   Y    I   ++  ++  G + +   +AGV  G
Sbjct: 261 LGFLYELDAIAACVVGGVSFAGGVGS---IAGVVTG 293