Pairwise Alignments

Query, 349 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 359 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  213 bits (541), Expect = 8e-60
 Identities = 131/350 (37%), Positives = 197/350 (56%), Gaps = 8/350 (2%)

Query: 3   LERRESVPAWASVAAPLAAVAAALILCALLVAASGAPVLKAFATLFTGGFGSRFAIGETL 62
           ++RR       + A   AA+  AL+  A L+  SG  V KAF++L  G FGS+ A+  +L
Sbjct: 4   VQRRSGNSLSWNFACYAAAMLCALVSAAALLHLSGGDVAKAFSSLIVGAFGSQKALLGSL 63

Query: 63  TRATPLILTGLAAAVAFRAKLWNIGAEGQLYLGALAA--VALGSGPLALPAWALLPVVML 120
            +ATPL+L GL   +AFRAK+WNIG EGQ+  GA+ A   +L  GPL  P W    V++L
Sbjct: 64  AKATPLLLVGLGTVIAFRAKIWNIGQEGQVLAGAMCAYWASLWIGPL--PYWIAFTVLVL 121

Query: 121 GAALAGGLALLGPALLKTRFGVDEVVTTLLLNFIVLLFVSMMLEGP--MKDPMAMGWPQS 178
                GG   +   +LKTRFG  E+++T++LN+IV+  ++ +L+G   M+  + + + QS
Sbjct: 122 AGLAGGGALGVLAGVLKTRFGTSEIISTVMLNYIVIFLLAYLLDGGPWMETGVTVAYHQS 181

Query: 179 AAMLPEAELPRLVARS--RIHAGLLIAVALAGLVWLLKSRTIWGFEMRALGANPRAAAFA 236
             +    E P L+ +   ++H G L+A+    L  +L  RT  G+E+RA G+NP A  F 
Sbjct: 182 PPVNAMLEWPTLLGQGAHKLHFGFLLALVATVLCAVLLERTPLGYEIRAFGSNPTALRFR 241

Query: 237 GVPVGKVVLRVALLSGGLAGLAGACEVAGRAGYLTLDMSPGYGYSGIVIAMLAQLNPLGV 296
           G  + +++L V L+SG LAGLAGA E+ G +  L  +   G G SGIV+AM+  L P G 
Sbjct: 242 GTDISRLLLVVMLVSGALAGLAGAGELFGTSHRLRAETLLGIGSSGIVVAMVGGLRPSGA 301

Query: 297 IAAAVMVAGVFVGADAMSRAVGVPNYIADVLVAVSLLCMLTAMLFTRYRL 346
           + AA+    +  GA  M    G P  +   +  + LL  L A + TR  +
Sbjct: 302 MLAALFFGALKSGAIYMRLQSGTPAGLVSAMEGLVLLFFLCAAVATRIHI 351