Pairwise Alignments

Query, 349 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

Subject, 365 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  234 bits (597), Expect = 3e-66
 Identities = 126/323 (39%), Positives = 194/323 (60%), Gaps = 1/323 (0%)

Query: 14  SVAAPLAAVAAALILCALLVAASGAPVLKAFATLFTGGFGSRFAIGETLTRATPLILTGL 73
           ++  P AAV  AL   A L+A +G         +  G F    +I E L +ATPLIL G+
Sbjct: 30  TIIQPAAAVVLALACGAALLAFNGYEARAVIDVMVLGVFQDTRSIAEILLKATPLILIGV 89

Query: 74  AAAVAFRAKLWNIGAEGQLYLGALAAVALGSGPLALPAWALLPVVMLGAALAGGLALLGP 133
              VAFR  +WNIGAEGQ Y GA+AA A G     L AW  +P+VM+  ALAG       
Sbjct: 90  GLCVAFRCSIWNIGAEGQFYAGAIAATAAGVSFDGLTAWIYVPLVMIAGALAGAAWAAIA 149

Query: 134 ALLKTRFGVDEVVTTLLLNFIVLLFVSMMLEGPMKDPMAMGWPQSAAMLPEAELPRLVAR 193
            LLK  F   E+VTT++LN+I ++  S ++ GP++D  A  +PQSA ++ EA +PR++  
Sbjct: 150 GLLKVYFRASEIVTTIMLNYIAIIMTSYLVTGPLRD-AAAAYPQSARLVQEAWMPRILPP 208

Query: 194 SRIHAGLLIAVALAGLVWLLKSRTIWGFEMRALGANPRAAAFAGVPVGKVVLRVALLSGG 253
           +R+H G+L+A+ALA ++++   R+  G+ +R +G +P AA +AG+ V + ++    LSG 
Sbjct: 209 TRLHIGILVALALAVVMYIFLFRSTRGYALRVVGISPDAARYAGISVPRNIMLSICLSGS 268

Query: 254 LAGLAGACEVAGRAGYLTLDMSPGYGYSGIVIAMLAQLNPLGVIAAAVMVAGVFVGADAM 313
           +AGLAGA E+AG    L   +SPGYG+ GI +A+LA  NP+G + + ++ A +  G++ M
Sbjct: 269 MAGLAGAFEIAGVTRRLFQSISPGYGFEGIAVALLANNNPIGAVFSGLLFAILRSGSELM 328

Query: 314 SRAVGVPNYIADVLVAVSLLCML 336
                VP  +  V+  + +L ++
Sbjct: 329 QITAQVPQVLVLVIQGIVILSVV 351



 Score = 30.4 bits (67), Expect = 8e-05
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 13/182 (7%)

Query: 169 DPMAMGWPQSAAMLPEAELPRLVARSRIHAGLLIAVALAGLVWLLKSRTIWGFEMRALGA 228
           D M +G  Q    + E  L    A   I  G+ + VA    +W + +     F   A+ A
Sbjct: 61  DVMVLGVFQDTRSIAEILLK---ATPLILIGVGLCVAFRCSIWNIGAEG--QFYAGAIAA 115

Query: 229 NPRAAAFAGVPVGKVVLRVALLSGGLAG-----LAGACEVAGRAGYLTLDMSPGYGYSGI 283
                +F G+    + + + +++G LAG     +AG  +V  RA  +   +     Y  I
Sbjct: 116 TAAGVSFDGLTAW-IYVPLVMIAGALAGAAWAAIAGLLKVYFRASEIVTTIM--LNYIAI 172

Query: 284 VIAMLAQLNPLGVIAAAVMVAGVFVGADAMSRAVGVPNYIADVLVAVSLLCMLTAMLFTR 343
           ++       PL   AAA   +   V    M R +        +LVA++L  ++   LF  
Sbjct: 173 IMTSYLVTGPLRDAAAAYPQSARLVQEAWMPRILPPTRLHIGILVALALAVVMYIFLFRS 232

Query: 344 YR 345
            R
Sbjct: 233 TR 234