Pairwise Alignments
Query, 511 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H
Subject, 503 a.a., nucleoside ABC transporter ATP-binding protein from Pseudomonas syringae pv. syringae B728a
Score = 312 bits (799), Expect = 2e-89
Identities = 198/490 (40%), Positives = 276/490 (56%), Gaps = 28/490 (5%)
Query: 7 ALRLRAITKRFGALLANDAISLDLAKGEILALLGENGAGKTTLMNILFGHYLADSGSIEV 66
AL+L I+K F A GE+ ALLGENGAGK++LMNI G Y ++G++ +
Sbjct: 6 ALQLTGISKSFDGFKALIDADFTACWGEVHALLGENGAGKSSLMNIAAGLYAPETGTLLL 65
Query: 67 FGKPLTAASPRAAIAAGLGMVHQHFTLAENLSVLENVLIGTEPLWLPRL-GRAKARARLL 125
P+ PR A +GMVHQHF L + +V +N+L+ LP G R RL
Sbjct: 66 DDNPVQLQGPRDASRYRIGMVHQHFKLVKPFTVAQNILLA-----LPEQPGEGSYRKRLR 120
Query: 126 ALGRRF-------GLEVNPDAAVAALSVGERQRVEILKALYRDARILILDEPTAVLTPQE 178
AL + G ++P V +LSV E+QRVEILK L ARILILDEPTAVLT QE
Sbjct: 121 ALEQEIVGKAETLGFAIDPARTVDSLSVAEQQRVEILKVLLAGARILILDEPTAVLTDQE 180
Query: 179 SEALFSTLRTMVGDGLSVIFISHKLNEVAAVSSRVAVLRGGKLVAERPTAGMNRAALAEL 238
+E L T++ G +V+ ++HK+ +V + RV V+RGG+ + ++ L +L
Sbjct: 181 AERLLLTVQAFARQGAAVVLVTHKMADVKRYADRVTVMRGGRTIQTLDPQRVSVEQLVQL 240
Query: 239 MVGRPVADPVRRPLPPGPPALALRAITVNGPGIRAPLRDVSLTVHRHEIVGIAGVSGNGQ 298
VG V +P PG L ++ + G + L V+LT+H +I GIAGV GNGQ
Sbjct: 241 TVGESVPVAEHQPATPGEVRLQVKELRSVG---SSTLNGVNLTLHAGQIYGIAGVGGNGQ 297
Query: 299 ATLAALISGLVAPTSGQFRLFGQEPARHRPT-QMITLGVGRIPEDRHAEGLVGDLAIWE- 356
A LA + GL T G+ + G R Q L + IP DR+ L G L++ E
Sbjct: 298 AELANALMGLAQATEGEIHMAGFGDLRDASADQRRQLRIASIPADRYGAALAGSLSVAEN 357
Query: 357 ----NLIAEQYRDKAFQRAGFVKRKAARAHARALIADFDVR-CSSPDATTRLLSGGNMQK 411
N+ + QY +F R G+ K + A+ +ADFDV+ S D LLSGGN QK
Sbjct: 358 FAIGNIHSGQY--GSFWRLGY---KRLKQDAQRAVADFDVQGVRSLDQKAALLSGGNAQK 412
Query: 412 LILGRTLTRDPGLILANQPNRGLDIGAVAFVHDRLLRAREKGAAIVLISEDLDEILALSD 471
L++ R +RDP L+L + P+RGLD+ A VH RL AR+ GAA+++ISEDLDE+LAL+D
Sbjct: 413 LVIAREFSRDPQLVLVHSPSRGLDVRATQAVHARLRAARDAGAAVLVISEDLDEVLALAD 472
Query: 472 RIAVIHAGRL 481
R+ V++ GR+
Sbjct: 473 RVGVMNGGRI 482
Score = 76.6 bits (187), Expect = 2e-18
Identities = 66/229 (28%), Positives = 107/229 (46%), Gaps = 15/229 (6%)
Query: 24 DAISLDLAKGEILALLGENGAGKTTLMNILFGHYLADSGSIEVFG----KPLTAASPRAA 79
+ ++L L G+I + G G G+ L N L G A G I + G + +A R
Sbjct: 275 NGVNLTLHAGQIYGIAGVGGNGQAELANALMGLAQATEGEIHMAGFGDLRDASADQRRQL 334
Query: 80 IAAGLGMVHQHFTLAENLSVLENVLIGT------EPLWLPRLGRAKARARLLALGRRFGL 133
A + LA +LSV EN IG W RLG + + F +
Sbjct: 335 RIASIPADRYGAALAGSLSVAENFAIGNIHSGQYGSFW--RLGYKRLKQDAQRAVADFDV 392
Query: 134 EV--NPDAAVAALSVGERQRVEILKALYRDARILILDEPTAVLTPQESEALFSTLRTMVG 191
+ + D A LS G Q++ I + RD +++++ P+ L + ++A+ + LR
Sbjct: 393 QGVRSLDQKAALLSGGNAQKLVIAREFSRDPQLVLVHSPSRGLDVRATQAVHARLRAARD 452
Query: 192 DGLSVIFISHKLNEVAAVSSRVAVLRGGKLVAERPTAGMNRAALAELMV 240
G +V+ IS L+EV A++ RV V+ GG++VAE +R A+ + MV
Sbjct: 453 AGAAVLVISEDLDEVLALADRVGVMNGGRIVAEFAHPA-DRQAIGKAMV 500
Score = 52.4 bits (124), Expect = 4e-11
Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 16/257 (6%)
Query: 258 ALALRAITVNGPGIRAPLRDVSLTVHRHEIVGIAGVSGNGQATLAALISGLVAPTSGQFR 317
AL L I+ + G +A L D T E+ + G +G G+++L + +GL AP +G
Sbjct: 6 ALQLTGISKSFDGFKA-LIDADFTACWGEVHALLGENGAGKSSLMNIAAGLYAPETGTLL 64
Query: 318 LFGQEPARHRPTQMITLGVGRIPEDRHAEGLVGDLAIWENLIA---EQYRDKAFQRAGFV 374
L P +G + + H + LV + +N++ EQ + ++
Sbjct: 65 LDDNPVQLQGPRDASRYRIGMVHQ--HFK-LVKPFTVAQNILLALPEQPGEGSY------ 115
Query: 375 KRKAARAHARALIADFDVR--CSSPDATTRLLSGGNMQKLILGRTLTRDPGLILANQPNR 432
RK RA + ++ + P T LS Q++ + + L +++ ++P
Sbjct: 116 -RKRLRALEQEIVGKAETLGFAIDPARTVDSLSVAEQQRVEILKVLLAGARILILDEPTA 174
Query: 433 GLDIGAVAFVHDRLLRAREKGAAIVLISEDLDEILALSDRIAVIHAGRLSPPVARESVTI 492
L + + +GAA+VL++ + ++ +DR+ V+ GR + + V++
Sbjct: 175 VLTDQEAERLLLTVQAFARQGAAVVLVTHKMADVKRYADRVTVMRGGRTIQTLDPQRVSV 234
Query: 493 GQLGVMMAGDGPQEAGH 509
QL + G+ A H
Sbjct: 235 EQLVQLTVGESVPVAEH 251