Pairwise Alignments

Query, 301 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 297 a.a., DNA-binding transcriptional regulator OxyR from Vibrio cholerae E7946 ATCC 55056

 Score =  213 bits (541), Expect = 6e-60
 Identities = 117/294 (39%), Positives = 174/294 (59%)

Query: 4   LRQLRYIVAVADTLNFRRAAEVCLVSQPTLSVQIAEVEAFLGLTLFERTRRSVVLTPIGR 63
           +R   Y+VA+AD  +FR+AAE C VSQPTLS QI ++E  +G TL ER+ R V+ T  G 
Sbjct: 3   IRDFEYLVALADHKHFRKAAEACFVSQPTLSGQIRKLEDEIGTTLLERSSRRVLFTEAGL 62

Query: 64  EIAERARGVLREANEIVDLARSLRAPLSGPLRLGVIATLGPYLLPYVLSAFREKHPSLRL 123
           ++ ++A+ +L E     D+A      ++GPL +G I TLGPYLLP ++   +E+ P L L
Sbjct: 63  QLVDQAKKILSEVKTFKDMANQQTGAMTGPLHIGFIPTLGPYLLPKIIPTLKERFPELEL 122

Query: 124 YLREDPSLRLERRLRAGELDLILVDMPIDDAGLDIMDLFFEPLWLAAPPDHALADRTRVS 183
           YL E  + +L R+L  G+LD +++    + A    ++L+ E L +A P DHA A R  V 
Sbjct: 123 YLHEAQTNQLVRQLEEGKLDCLVLASVEETAPFKEIELYNEVLSIAVPCDHAWAARDEVD 182

Query: 184 VEDLAGRDLLLLEEGHCLRDEVLDLCRRVGAREHGGFQATSLDTLRQMVASRIGLALLPD 243
           + +L G+ +L L +GHCLRD+ L  C   GA++   F+ATSL+TLR MVA+  G+ LLP+
Sbjct: 183 MLELKGKTVLALGDGHCLRDQALGFCFAAGAKDDERFKATSLETLRNMVAAGAGITLLPE 242

Query: 244 LYVAAEAAQDPNIRMIPFSAPPVRRVGLAWRKTSARVAEFREFGAFILARLPAS 297
           L +  +  +D    +   +  P RR+ LA+R  S     F +    I  RL  S
Sbjct: 243 LALPEDKTKDGVCYLRAVNPIPSRRLVLAYRPGSPLRQRFEQLAEVIKHRLQQS 296