Pairwise Alignments

Query, 301 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

Subject, 305 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  181 bits (460), Expect = 1e-50
 Identities = 102/293 (34%), Positives = 162/293 (55%), Gaps = 1/293 (0%)

Query: 3   TLRQLRYIVAVADTLNFRRAAEVCLVSQPTLSVQIAEVEAFLGLTLFERTRRSVVLTPIG 62
           +L+ L Y+V +    NF RAA++C VSQ TLS  I  +E  LG  L ER  +S + T IG
Sbjct: 6   SLKNLYYLVNLYQEQNFNRAAKLCHVSQSTLSSGIQNLEEQLGHQLIERDHKSFIFTAIG 65

Query: 63  REIAERARGVLREANEIVDLARSLRAPLSGPLRLGVIATLGPYLLPYVLSAFREKHPSLR 122
            E+ +R+R +L + +++V+L +    P++G +RLG I T+ P+LL  V+   ++++P L 
Sbjct: 66  EEVVQRSRKLLTDVDDLVELVKHQGQPMTGDIRLGCIPTIAPFLLSRVVKHCQQEYPELT 125

Query: 123 LYLREDPSLRLERRLRAGELDLILVDMPIDDAGLDIMDLFFEPLWLAAPPDHALADRTRV 182
           L+L+ED + RL   L  GELDL+L+ +P D +G   M +  +P  L    + +      +
Sbjct: 126 LFLKEDTTERLLDALGKGELDLLLLALPADTSGYHSMKVGIDPFKLVMHKELSSEVHQPI 185

Query: 183 SVEDLAGRDLLLLEEGHCLRDEVLDLCRRVGAREHGGFQATSLDTLRQMVASRIGLALLP 242
             + L    + LL+  HC+    +  C    + +   F ATSL TL QMV S++G   LP
Sbjct: 186 DYKALPDESIFLLQSEHCITGHAISACSLADSDKINPFAATSLHTLVQMVNSKLGTTFLP 245

Query: 243 DLYVAAEAAQDPNI-RMIPFSAPPVRRVGLAWRKTSARVAEFREFGAFILARL 294
            + + A    D ++  + P    P R +GL WR+TS+R+  FR  G  I + L
Sbjct: 246 QMAIDAGILNDTDLTALTPPGEAPYRDIGLVWRQTSSRIMTFRTLGKAIQSLL 298