Pairwise Alignments

Query, 820 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 1071 a.a., Diguanylate cyclase/phosphodiesterase from Sinorhizobium meliloti 1021

 Score =  244 bits (622), Expect = 2e-68
 Identities = 182/555 (32%), Positives = 278/555 (50%), Gaps = 37/555 (6%)

Query: 251  RLQSVLESTSDGIITVDDKGSIESINGAAERVLGLTRDEAVGRPLGDLIPLDRLAEDGGE 310
            +L SVLEST D ++ +D    +  +N  A ++L +  DEA+GR    L P +       E
Sbjct: 529  QLSSVLESTMDSVMLLDADWRVRYLNENARKLLQVG-DEALGRVFWKLFPEE-------E 580

Query: 311  EGALSRRLLALRGREIDLPARRADGAAFHLSLKLSDFMLGE----RRYFNALIADVTDRK 366
            EG+ ++    +  R +            HLS  L  ++       R   +    D+T+R+
Sbjct: 581  EGSFAKHCREVMDRRV------RSFFEDHLS-SLGRWVEANASPTRDGISIFCRDITERR 633

Query: 367  AMID-------RLTFLAQRDPLTGLINRRSFFDDLEKAVARAGRFPAAGVAVISIDLDRF 419
               +       ++  +A+ D LTGL NR  F +  E+A+  +     A +AV+ +DLD F
Sbjct: 634  RAEEDTLLAQKQMAHMARHDMLTGLANRMFFRECFEEALNESNH---ARMAVLCLDLDGF 690

Query: 420  KYVNDSLGHQAGDCLLKEVAEVLFGRLRETDLLARLGGDEFAVLLHGV-NREGALHVAEA 478
            K VND+LGH AGD LL++V+  L   +R T+ +ARLGGDEFA++     +R+ A  +A+ 
Sbjct: 691  KAVNDTLGHPAGDALLRQVSTRLIQAVRTTETVARLGGDEFAIIQPLTESRDEAFRLAQR 750

Query: 479  LRLCLADYAFSYDGKSVEIGCSLGVATWAADVDDPEDLLARADMAMRLAKRAGRNRVHLF 538
            L   L++  FS +G +  +G S+G+A    D    ++L+  AD+A+  AK +GR    LF
Sbjct: 751  LIDTLSE-PFSIEGAAANVGTSIGIAFAPEDGTSADELIKAADIALYSAKSSGRGTYKLF 809

Query: 539  EEGDLEVRARVVADAGYSKLIDRGLRNNLFRPVFQPIIDVTSGAVVGHETLARLHDPAAI 598
               D+ + A++ A       +   L    F   +QP++ + S  V   E L R   P   
Sbjct: 810  ---DVAMHAQLQAHQQMKITMRDALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPERG 866

Query: 599  GLTMDVLIPVAERFGLAVEIDRQIILAVTEALAEDAGWLEGGFLSFNLSAQSVGDGRIFS 658
             +     IP+AE  GL V I   I+    EA  + A W E   ++ NLS        +  
Sbjct: 867  MIAPSEFIPIAEETGLIVPIGEWIL---GEACRQAARWPERVSVAVNLSPVQFKHRNLVR 923

Query: 659  AVRRLIATRRLPPQALIFEITETAAIASLAAARTFLKALTDLGCKTALDDFGSGYSSFTY 718
            AV + ++  RL P  L  EITET  +         L+ L  LG K A+DDFG+GYSS  Y
Sbjct: 924  AVAKALSATRLDPARLQLEITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGY 983

Query: 719  LRELPVDFLKIDGRYVRDIHHDPVKAAMVQAINTVAHAMGMRTIAECVEEASGLEVLRQS 778
            LR  P D +K+D  +VRD+ H     A+V+A+  +  ++GM T  E VE    L V+   
Sbjct: 984  LRSFPFDKIKVDQAFVRDLPHGKESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVVDSE 1043

Query: 779  GVDCAQGFLFGRPAP 793
            G +  QG+LF RP P
Sbjct: 1044 GFNEVQGYLFSRPLP 1058



 Score = 32.0 bits (71), Expect = 2e-04
 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 253 QSVLESTSDGIITVDDKGSIESINGAAERVLGLTRDEAVGRPLGDLIPLDRLAEDGGEEG 312
           Q +++  ++ +I  DD      IN AA  +LG  R++ +GR   D++P     E      
Sbjct: 18  QRLMDGIAEPVIIKDDASRFVFINDAACDLLGKDRNQLIGRTDHDILP----GEQADRIV 73

Query: 313 ALSRRLLAL-RGREIDLPARRADG 335
           +L R +L+   G E++      DG
Sbjct: 74  SLDRIVLSTSEGHELEEQITTPDG 97