Pairwise Alignments

Query, 820 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

Subject, 837 a.a., putative diguanylate phosphodiesterase (RefSeq) from Shewanella amazonensis SB2B

 Score =  238 bits (608), Expect = 8e-67
 Identities = 170/557 (30%), Positives = 276/557 (49%), Gaps = 16/557 (2%)

Query: 239 NGMRLQVHSRQLRLQSVLESTSDGIITVDDKGSIESINGAAERVLGLTRDEAVGRPLGDL 298
           N +  ++ +++ + + +LE  +D +I  D KG +  +N  A R+LG    +     +  +
Sbjct: 284 NKLLAEIFAQKEQARVILEGIADAVILTDAKGDVLYLNPPACRLLGGQAADFAATSVSGI 343

Query: 299 IPLDRLAEDGGEEGALSRRLLALRGREIDLPARRADGAAFHLSLKLSDFMLGERRYFNAL 358
           +         G + +L  R L  +G+     + R  G     +L   +     R      
Sbjct: 344 L---------GIKPSLLDRFLKEQGQACKQISLRFAGRLLQCTLSAIEDHQHTRTGALLA 394

Query: 359 IADVTDRKAMIDRLTFLAQRDPLTGLINRRSFFDDLEKAVARAGRFPAAGVAVISIDLDR 418
           + DVT  + +   L   A+ D +TGL NR +F   +++  +         VA+  +DL++
Sbjct: 395 LRDVTAEERLKSELRRQAEEDAVTGLPNRTTFEARMKRLASGQET-----VALCYLDLEQ 449

Query: 419 FKYVNDSLGHQAGDCLLKEVAEVLFGRLRETDLLARLGGDEFAVLLHGVNREGALHVAEA 478
           FK +NDS GH  GD +L  VA+     L   +LL R+GGDEF +LL G +      + + 
Sbjct: 450 FKIINDSCGHLEGDRMLCMVAKTFQSCLAPGELLGRVGGDEFGILLLGRSAHEVALLLKT 509

Query: 479 LRLCLADYAFSYDGKSVEIGCSLGVATWAADVDDPEDLLARADMAMRLAKRAGRNRVHLF 538
           L+  L+       G+   +G S+GVA   A +    +L   AD+A   AK+ G N++H +
Sbjct: 510 LQQKLSMQVLESQGQCHRVGVSIGVAFARAPLPPVGELFKDADIACVAAKQKGSNQIHFY 569

Query: 539 EEGDLEVRARVVADAGYSKLIDRGLRNNLFRPVFQPIIDVTSGAVVGH-ETLARLHDPAA 597
           ++ D E+  +  A   ++  I + + N      FQPI  +  G+     E L R+ +   
Sbjct: 570 DDKDKELNYQRNAPK-WALRIAKAIHNRELELYFQPIHSLHGGSPRKRMEILLRIRESNG 628

Query: 598 IGLTMDVLIPVAERFGLAVEIDRQIILAVTEALAEDAGWLEGGFLSFNLSAQSVGDGRIF 657
             L     I  AERF L  E+D+ ++    E LA    +     LS NLS  S+G   + 
Sbjct: 629 RILPPAQFIASAERFKLMPEVDKAVVSMAMEWLAAHPNFWHDHCLSINLSGNSLGVEGME 688

Query: 658 SAVRRLIATRRLPPQALIFEITETAAIASLAAARTFLKALTDLGCKTALDDFGSGYSSFT 717
           S +   +    +PP  + FEITET AI +   A   L++L   G   A+DDFGSG++S+ 
Sbjct: 689 SFIVEQLQRNGIPPACICFEITETTAIQNRQRALDMLRSLRKQGFAFAIDDFGSGFASYG 748

Query: 718 YLRELPVDFLKIDGRYVRDIHHDPVKAAMVQAINTVAHAMGMRTIAECVEEASGLEVLRQ 777
           YLRELPVD++KIDG +VR +  +    A+V++I+ V   MG+ T+AE VE    +  L +
Sbjct: 749 YLRELPVDYVKIDGCFVRQLASNAKDYAIVKSIHDVCSVMGIETVAEFVESQDIMARLEE 808

Query: 778 SGVDCAQGFLFGRPAPL 794
            G++ AQG+  GRP PL
Sbjct: 809 IGINYAQGYAVGRPKPL 825