Pairwise Alignments

Query, 335 a.a., Radical SAM (NCBI) from Rhodospirillum rubrum S1H

Subject, 320 a.a., radical SAM protein from Methanococcus maripaludis S2

 Score = 64.3 bits (155), Expect = 4e-15
 Identities = 60/284 (21%), Positives = 112/284 (39%), Gaps = 23/284 (8%)

Query: 29  PSQINVDVTEVCNLACVHCPHPQFKKSVHYAGRMLDPALNDKMVEEVRDHGQGRVGYIRY 88
           P  I ++    CN  C +CPHP+  +     G + D   N K+ +E+ + G   V  +  
Sbjct: 39  PLFIKIETVNYCNSQCKYCPHPKMTRE---KGLISDELFN-KIAKELVNWG---VKAVHL 91

Query: 89  TAAGEPMAHPAIFPMLAKAVARSGTT-VSLTTNGMLLDEGRRARLLETGIHLIDISIDAF 147
           T  GE +  P I   +           +++ TNG  L E    ++L + +  I IS D F
Sbjct: 92  TNFGESLLDPKITERIDYLKNLDNDLYITIITNGFALSEKNIDKILNSNLDEIQISFDGF 151

Query: 148 LPETYARVRVGGDLERVRGGVLRLMEGAARRVDPPKIVVSFVEQP--FNQGETADFERFW 205
             E Y   R     E ++  +  L+    +R     I ++ +  P   ++ +  +F+  W
Sbjct: 152 SKEHYEFYRTPFKYENIKSKLTNLLSEKDKRNSKLVIKLNTIYNPDEISEKQLHEFKHGW 211

Query: 206 KENGAAYVVIRRLHSCAGAAQDLAATLRVEQGETRRPCLYPWERIVLNPSGQLSFCPADW 265
             N    + I++LH+ +            E       C+  +  + +  +G +  C  D+
Sbjct: 212 --NSVNGINIQKLHNWSSE----------EVNNNVNGCIDIYTYMTILRNGDVVPCCLDF 259

Query: 266 AHGAAIAEYRDTTIREVWQGPFYRALREAHLTNSYANHGFCGQC 309
                +    + T++E+W+   Y   R   + N   N   C  C
Sbjct: 260 DGKINLGNCNEDTLQEIWENEKYTNFRNL-VFNDVRNIDLCKNC 302