Pairwise Alignments

Query, 355 a.a., Polysaccharide biosynthesis protein CapD (NCBI) from Rhodospirillum rubrum S1H

Subject, 688 a.a., nucleotide sugar epimerase/dehydratase WbpM from Pseudomonas fluorescens FW300-N2E2

 Score =  130 bits (327), Expect = 1e-34
 Identities = 102/306 (33%), Positives = 152/306 (49%), Gaps = 42/306 (13%)

Query: 2   LTGQRVLITGGTGSLGRVLVRRLLSGEMGTPERVTIMSRDEAKQNALRTSYLVSAGRHPT 61
           + GQ VL+TG  GS+G  L R++L+      +  T++  + ++ N     Y + +   P 
Sbjct: 319 IAGQSVLVTGAGGSIGSELCRQILA-----LQPTTLLLYEHSEFNL----YSILSELEP- 368

Query: 62  DEIIYENFRRTLAFQIGDVRDRDAVSLALS--DADVVFNAAALKQVPTCEYFPYEAIRTN 119
             I  E+    +   +G VRD + +   +     + V++AAA K VP  E+   E +  N
Sbjct: 369 -RIARESLSVRVLPILGSVRDENKLLDVMKTWSVNTVYHAAAYKHVPMVEHNIAEGVLNN 427

Query: 120 VEGPWNIITTIRDRRLPVKTVVGISTDKAAKPINVMGMTKALQERLF--LSANLG----- 172
           V G  N  T     +  V   V ISTDKA +P NVMG TK L E     LS  L      
Sbjct: 428 VIGTLN--TAQAALQAGVSNFVLISTDKAVRPTNVMGSTKRLAELTLQALSRELAPVLFG 485

Query: 173 -------CGQTRFIAVRYGNVLASRGSVVPLFHQQIAAGGPVTLTDPDMTRFLLSLNDAV 225
                    +TRF  VR+GNVL S GSV+PLFH+QI +GGP+T+T P +TR+ +++ +A 
Sbjct: 486 DRANVSRVNKTRFTMVRFGNVLGSSGSVIPLFHKQIKSGGPLTVTHPKITRYFMTIPEAA 545

Query: 226 DLIFSACRTALPGETYV---------PRVASARVEDIALALIGER----AIPIKIIGLRP 272
            L+  A    L G+ +V           +A   +    L++  E+     I I+  GLRP
Sbjct: 546 QLVIQAGSMGLGGDVFVLDMGEPVKIIELAEKMIHLSGLSVRSEKNPHGDISIEFTGLRP 605

Query: 273 GEKSHE 278
           GEK +E
Sbjct: 606 GEKLYE 611