Pairwise Alignments

Query, 665 a.a., Gram negative topoisomerase IV, subunit B (NCBI) from Rhodospirillum rubrum S1H

Subject, 631 a.a., DNA topoisomerase IV subunit B from Klebsiella michiganensis M5al

 Score =  465 bits (1197), Expect = e-135
 Identities = 283/649 (43%), Positives = 385/649 (59%), Gaps = 28/649 (4%)

Query: 16  AYTARSIEVLEGLEPVRRRPGMYIGGTDERALHHLVAEILDNAMDEAVAGYAQVIDIDLA 75
           +Y A +IEVL GLEPVRRRPGMY   TD    +HL  E++DN++DEA+AG+A+ +++ L 
Sbjct: 5   SYNADAIEVLTGLEPVRRRPGMY---TDTTRPNHLGQEVIDNSVDEALAGHAKRVEVILH 61

Query: 76  VDGSVCVRDNGRGIPIDPHPRFPDKSALEVILTTLHSGGKFGGDAYKVSGGLHGVGISVV 135
            D S+ V D+GRG+P+D HP      A+E+IL  LH+GGKF    Y+ SGGLHGVGISVV
Sbjct: 62  ADQSLEVIDDGRGMPVDIHPE-EGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGISVV 120

Query: 136 NALSDSLRVEVARDRTLWAQDFCRGAPLGPLQKIGPAPNRR-GTQVRFHPDAEIFGPRAR 194
           NALS  + V V RD  +++  F  G  +  L   G    R  GT V F PD E F    R
Sbjct: 121 NALSKRVEVNVRRDGQIYSIAFENGDKVEDLHVTGTCGKRNTGTSVHFWPD-ESFFDSPR 179

Query: 195 FKPALLHRMARSKAYLFRGVRIRWSCAPELLPDDAGVPAEDVFHFPNGLGDYLGHALANR 254
           F  + L  + ++KA L  GV I +    +L+ D     +E  + + +GL DYL  A+   
Sbjct: 180 FSVSRLSHLLKAKAVLCPGVEIVFR---DLVND-----SEQRWCYADGLTDYLSEAVNGL 231

Query: 255 PLVGGRTFAGTANLPDDMGTVEWALCW-PEDDEPFFNSYVNTIPTPEGGTHEAGLRNALT 313
           PL+  + F GT +   D   V+WAL W PE  E    SYVN IPT +GGTH  GLR  L 
Sbjct: 232 PLLPEKPFVGTFS--GDTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLL 289

Query: 314 RGLRSFAEMSGNKKGAAALTAEDVVGGAAVMFSMFLRDPQFQGQTKEKLASQEATRLVEQ 373
             +R F E          L+AED+    A + S+ ++DPQF GQTKE+L+S++    V  
Sbjct: 290 DAMREFCEYRNILPRGVKLSAEDIWERCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSG 349

Query: 374 ALRDPFDHWLTGAPDSANLLLTHALERADERLRRRQAKETSRKTATKKLRLPGKLSDCTR 433
            ++D F  WL     SA LL   A+  A  RLR   AK+  RK  T    LPGKL+DCT 
Sbjct: 350 VVKDAFSLWLNQNVQSAELLAEMAISSAQRRLRA--AKKVVRKKLTSGPALPGKLADCTA 407

Query: 434 STRQGTELFLVEGDSAGGSAKQARDRQTQAVLPLRGKILNVASASLDKLRGNQELSDLAE 493
                TELFLVEGDSAGGSAKQARDR+ QA++PL+GKILN    S D++  +QE+ D++ 
Sbjct: 408 QDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISV 467

Query: 494 ALGCGTRGAFDLEHLRYDKVVIMTDADVDGAHIASLLMTFFFREMPALVSAGHLYLAMPP 553
           A+G     + DL  LRY K+ I+ DAD DG HIA+LL   F R    LV  GH+Y+A+PP
Sbjct: 468 AIGIDP-DSDDLSQLRYGKICILADADSDGLHIATLLCALFVRHFRTLVKHGHVYVALPP 526

Query: 554 LYRLTQGGTSVYARDDAHKDQLMKTVFKTKGKVEISRFKGLGEMPPAQLRETTMAYATRQ 613
           LYR+  G    YA  +  K  +++ + + KGK  + RFKGLGEM P QLRETT+   TR+
Sbjct: 527 LYRIDLGKEVYYALTEEEKAGVLEQLKRKKGKPNVQRFKGLGEMNPLQLRETTLDPNTRR 586

Query: 614 LLRVTVPGGKTEEDREDARETAKLVEELMGRK-PELRFRFIQENARFAE 661
           L+++ +       + ED ++T  +++ L+ +K  E R  ++QE    A+
Sbjct: 587 LVQLII-------NDEDEQQTTAMMDMLLAKKRSEDRRNWLQEKGDLAD 628