Pairwise Alignments

Query, 176 a.a., NusG antitermination factor (NCBI) from Rhodospirillum rubrum S1H

Subject, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

 Score =  216 bits (551), Expect = 1e-61
 Identities = 103/174 (59%), Positives = 136/174 (78%), Gaps = 1/174 (0%)

Query: 4   RWYVIHVYSGFENKVAQSIREQAIQKGMDSRIEEVLVPTEEIVEVRRGAKVNAERKFFPG 63
           RWYV+  +SGFE +VAQS+RE     GM+    EVLVPTEE+VE+R G +  +ERKFFPG
Sbjct: 8   RWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERKFFPG 67

Query: 64  YVLVKMDLSDETWHLVKNTAKVTGFLGGRG-RPSPISDREAERILHQVQEGIERPKPSIT 122
           YVLV+M ++DE+WHLV++  +V GF+GG   RP+PI+D+EA+ IL+++++  E P+P   
Sbjct: 68  YVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEAPRPKTM 127

Query: 123 FDVGEQVRVCDGPFTSFNGMVEDVDEEKARLKVSVSIFGRSTPVELEYSQVEKV 176
           F+ GE VRV DGPF  FNG VE+VD EK+RLKVSVSIFGR+TPVELE+ QVEK+
Sbjct: 128 FEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVEKL 181