Pairwise Alignments

Query, 447 a.a., SecY protein (NCBI) from Rhodospirillum rubrum S1H

Subject, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

 Score =  473 bits (1218), Expect = e-138
 Identities = 238/428 (55%), Positives = 316/428 (73%), Gaps = 7/428 (1%)

Query: 21  TELKKRIWFTLAALVVYRVGTYIPLPGIDPQAMADVFSRNGGGILGMFDMFAGGALSRMT 80
           +ELK R++F + AL+V+R G+++P+PGID   +A++F +  G I+ MF+MF+GGAL R +
Sbjct: 17  SELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERAS 76

Query: 81  IFALNIMPYISASIIMQLMTSISPQLEALKKEGESGRKRINQYTRYLTVLITALQAYGIA 140
           I AL IMPYISASI++QL+T + P L  LKKEGE+GR++I+QYTRY T+++   QA GIA
Sbjct: 77  ILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGIA 136

Query: 141 VGLESMTSSSGAAVHDAGMFFRFTTVVTLMGGTLFLMWLGEQITARGVGNGISLIIFTGI 200
            GL +M ++    V D  MF    TV +L+ GT+FLMWLGEQIT RG+GNGIS++IF GI
Sbjct: 137 TGLPNMVNN--LVVIDQTMFTLIATV-SLVTGTMFLMWLGEQITERGIGNGISILIFAGI 193

Query: 201 VAQLPHALVGMLELGRTGALSPAVILGILVLAVGVIAFIVFMERAQRRILIQYPKRQQGN 260
           VA LP A+   +E  R G L   ++L I VLA  VI F+VFMER QRRI++ Y KRQQG 
Sbjct: 194 VAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGR 253

Query: 261 KMYGGESSHMPLKINTPGVIPPIFASSILLLPMTAAQFSAGQGPE----WLTTITTLLGH 316
           K++  +S+H+PLKIN  GVIP IFASSI+L P T AQ+    G      WLT ++  L  
Sbjct: 254 KVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSP 313

Query: 317 GQPLYMALYAALIAFFAFFYTAVVFNPEDTAENLKKYGGFIPGIRPGRNTSEYLDYVLTR 376
           GQPLY+ LYAA I FF FFYTA+VFNP +TA+NLKK G F+PGIRPG  T++Y+D V+TR
Sbjct: 314 GQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTR 373

Query: 377 LTAVGAIYLIFISILPEFLISKVGVPFYFGGTSLLIVVTVTMDTVAQIQSHLLAHQYEGL 436
           LT  GA+Y+ FI ++PEF++    V FYFGGTSLLIVV V MD +AQ+Q+HL++HQYE +
Sbjct: 374 LTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433

Query: 437 IKKSKLRG 444
           +KK+ L+G
Sbjct: 434 LKKANLKG 441