Pairwise Alignments

Query, 330 a.a., Pseudouridine synthase, RluD (NCBI) from Rhodospirillum rubrum S1H

Subject, 339 a.a., pseudouridine synthase from Azospirillum brasilense Sp245

 Score =  342 bits (877), Expect = 8e-99
 Identities = 182/330 (55%), Positives = 229/330 (69%), Gaps = 5/330 (1%)

Query: 2   SVETVAVTQDEDGSRLDRWFKRRYPALTHGRLEKLLRTGQIRVDGKRVKSGERLEAGQQV 61
           SVET  VT DE   RLDRWFKR +P + HG L+KLLRTGQIRVDGKR ++  RL AGQ +
Sbjct: 8   SVETRTVTSDEADVRLDRWFKRHFPDVGHGYLQKLLRTGQIRVDGKRAETSTRLAAGQSI 67

Query: 62  RVPPLGDEA-PSPSSSGHAVPRPA-AEGEIRALRRAILHEDAHLIVINKEAGLAVQGGTG 119
           R+PPL D A P  +++  A  +PA ++ +I AL+  +L +D  +I +NK AGLAVQGGT 
Sbjct: 68  RIPPLADWAKPEGAAAAPAPKKPAMSDKDIAALQALVLFKDGDVIALNKPAGLAVQGGTN 127

Query: 120 TPHHLDGMLESLA-DGGETPRLVHRLDKDTSGVLVLARTQAAARALTSAFRSREALKVYW 178
           T  HLD ML++L  D  E P+LVHRLDKDTSGVL+LAR   AA  LT  FR R+  K+YW
Sbjct: 128 TTKHLDAMLDALRFDAKERPKLVHRLDKDTSGVLLLARNTFAASKLTEQFRGRDVRKIYW 187

Query: 179 AIVVGRPPMLQGTIKGALAKVAGGRGERMEINEEEGKRAVTDFRVVDQAAKACAWVELHP 238
           A  VG P   QG I  ALAK  G +GER+  +E++GKRAVT + V++   K  A+V + P
Sbjct: 188 AATVGVPKPYQGKIDLALAKEGGPQGERVAGDEDDGKRAVTYYTVLENLGKQAAFVAMWP 247

Query: 239 RTGRTHQLRVHCLEMGTPILGDGKYGGPGAFLEGTELPKRMHLHARALALPHPAGG--VL 296
           RTGRTHQLRVH   +GTPILGDGKY G GA L G E+ K++HLHAR L LPHP GG  ++
Sbjct: 248 RTGRTHQLRVHMNAIGTPILGDGKYAGQGAHLPGAEIQKKLHLHARRLILPHPRGGNRMI 307

Query: 297 EIIAPPPPHFVESLKTLGFALSDAPNPFEG 326
           ++ AP P H + + K LGF+ S   +PFEG
Sbjct: 308 DVTAPLPDHMLTTWKYLGFSASLKGDPFEG 337