Pairwise Alignments

Query, 326 a.a., chaperone DnaJ (NCBI) from Rhodospirillum rubrum S1H

Subject, 306 a.a., DNA-binding protein from Klebsiella michiganensis M5al

 Score =  159 bits (402), Expect = 8e-44
 Identities = 114/342 (33%), Positives = 167/342 (48%), Gaps = 58/342 (16%)

Query: 1   MKDPYTVLGVARGASQDEIKSAYRKLARSMHPDVNQNDPGAEDKFKDISGAYDLLSDPQK 60
           +KD Y +LGV        IK+AYR+LAR  HPDV++ +  AE KFKD++ A+++L D Q+
Sbjct: 3   LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEND-AEAKFKDLAEAWEVLKDDQR 61

Query: 61  RARFDRGEIDAAGNEHRGFRPGTGPYGARGAYRGASGNDGRSGGFGRFDFESTFGEDDLF 120
           RA +D+        +HR                G      R   + + DF      DD+F
Sbjct: 62  RAEYDQLW------QHRN-----------DPQFGRQQQHSREQSYSQQDF------DDIF 98

Query: 121 SEMFRRA---SRGQGGPGAGTAGAAGAGPRPVRGQDAQYRLKVTFEEAALGSTKRITLT- 176
           S MF +    SR Q G               VRG D +  + V  EE     T+ I+   
Sbjct: 99  STMFGQQAHHSRRQHG---------------VRGHDLEIEVAVFLEETLAEQTRTISYKL 143

Query: 177 ------------NRKTLDVRIPPGSEDGRSLRLKGQGADGSNGGAAGDALVEIGVKEHAF 224
                         KTL+V+IP G  DG+ +RLKGQG  G NGG  GD  + I +  H  
Sbjct: 144 PVYNVFGMVESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPL 203

Query: 225 FRRDGINVVVDVPVTLQEVVLGGKITVPTLEGKVSVTVPEGSNTGTVLRLRGKGIPQENG 284
           F   G N+ + +P+   E  LG K+T+PTL+  + +T+P GS  G  LR++GKG+  +  
Sbjct: 204 FDVVGHNLEIVLPLAPWEAALGAKVTIPTLKESILLTIPPGSQAGQRLRVKGKGLTSKT- 262

Query: 285 QRGDLLVRLGITLPDPVDPKLKTLVKKLKDPET--DPREQAG 324
             GDL   + I +P   D K + L ++L D ++  +PR+  G
Sbjct: 263 TTGDLYAVIKIVMPPKPDEKSRALWQQLADAQSSFEPRKTWG 304