Pairwise Alignments

Query, 645 a.a., Deoxyxylulose-5-phosphate synthase (NCBI) from Rhodospirillum rubrum S1H

Subject, 626 a.a., 1-deoxy-D-xylulose-5-phosphate synthase from Vibrio cholerae E7946 ATCC 55056

 Score =  564 bits (1454), Expect = e-165
 Identities = 306/629 (48%), Positives = 414/629 (65%), Gaps = 19/629 (3%)

Query: 8   PLLDTIRGPSDTRGLSVAQLEQLAREVRAEMIDAVSVTGGHLGSGLGVVELTVALHHVFD 67
           P L     P + R L    L +L  E+R  ++++VS + GHL SGLG VELTVALH+V+ 
Sbjct: 9   PTLALANTPDELRSLPKEVLPKLCDELRTYLLNSVSQSSGHLASGLGTVELTVALHYVYH 68

Query: 68  TPDDRIIWDVGHQCYPHKILTGRRDRIRTLRQGGGLSGFTLREESPYDPFGAGHSSTSIS 127
           TP D +IWDVGHQ YPHKILTGRRD++ T+RQ  GL  F  REES YD    GHSSTSIS
Sbjct: 69  TPFDHLIWDVGHQAYPHKILTGRRDQMPTIRQKDGLHPFPWREESEYDTLSVGHSSTSIS 128

Query: 128 AGLGMAIGSALAGDARDVVAVIGDGSMSAGMAYEAMNNAGAAKSRLIVILNDNDMSIAPP 187
           A LGMAI +   G  R VV+VIGDG+++AGMA+EAMN+AG     ++V+LNDN+MSI+  
Sbjct: 129 AALGMAICAGKEGKDRKVVSVIGDGAITAGMAFEAMNHAGDVHPDMLVVLNDNEMSISEN 188

Query: 188 VGAMSAYLSRLLSSKSWLSIRTLAKEIVARLPDALERTAKRAEEYARGMVTGGGTLFEEM 247
           VGA++ +L+++LS   + SIR   K++++ +P  ++   +R EE+ +GMV   GTLFEE+
Sbjct: 189 VGALNNHLAQVLSGSLYTSIREGGKKVLSGIP-PIKELVRRTEEHLKGMVV-PGTLFEEL 246

Query: 248 GFYYVGPIDGHRMDHLVPVLRNVREAGRDGPVLIHVVTQKGKGYAPAENAPDKYHGVSRF 307
           GF Y+GP+DGH +  L+  L+N+RE    GP  +HV+T+KGKGYAPAE  P  YHGV +F
Sbjct: 247 GFNYIGPVDGHDVLELIKTLKNMREL--KGPQFLHVMTKKGKGYAPAEKDPIGYHGVPKF 304

Query: 308 NVVTGVQEKAKPQAPSYTAVFGKQLVAAAAKDHRIVAVTAAMPGGTGLDKLAAAYPQRCF 367
           +       K+    P+++ +FG  L   AA+D +++A+T AM  G+G+ + +  YP + F
Sbjct: 305 DPSHHSLPKSSNTKPTFSKIFGDFLCDMAAQDPKLMAITPAMREGSGMVRFSKEYPSQYF 364

Query: 368 DVGIAEQHAVTFAAGLACEGLKPFVALYSSFLQRGYDQVVHDVVLQKLPVRFAIDRAGFV 427
           DV IAEQHAVT A G+A  G  P VA+YS+FLQRGYDQ++HDV +  LPV FAIDRAG V
Sbjct: 365 DVAIAEQHAVTLATGMAIAGYHPIVAIYSTFLQRGYDQLIHDVAIMNLPVMFAIDRAGIV 424

Query: 428 GADGATHGGVFDMAFLGCLPNLVVMCAADEAELARMVVTAAGHDSGPIALRYPRGEGVGV 487
           GADG TH G FD++++ C+PN+++M  ADE E  +M+ T   H  GP A+RYPRG G+GV
Sbjct: 425 GADGQTHQGAFDLSYMRCIPNMLIMAPADENECRQMLYTGHQH-QGPSAVRYPRGNGMGV 483

Query: 488 EIPEDPQPLAIGKGRIVR-----EGKGVALLSIGTRLQSCLEACEILAARGLTPTVADAR 542
           E+      L IGKGR++R     EG+ VA+LS GT L + L+A E L A     TVAD R
Sbjct: 484 ELESSFTALEIGKGRLMRESTACEGEKVAILSFGTLLPNALQAAEKLNA-----TVADMR 538

Query: 543 FLKPFDEELVADLAARHEVLIVVEEGAI-GGFCSHVATWLANQGLLDGGLKLRALHIPDR 601
           F+KP DE L+  LA  H+VL+ +EE AI GG  + V  +L  +  L   L    L +PD+
Sbjct: 539 FVKPLDEALIKQLAQTHDVLVTLEENAIAGGAGAGVIEFLMKEKQLKPVLN---LGLPDQ 595

Query: 602 FFEHDAPEVQCAKAGIDAQAITTAVLDAL 630
           F      E   A+ G+D   I  A+ D L
Sbjct: 596 FIVQGTQEEMHAELGLDGAGIERAIRDYL 624