Pairwise Alignments

Query, 397 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

Subject, 552 a.a., diguanylate cyclase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  127 bits (319), Expect = 8e-34
 Identities = 72/167 (43%), Positives = 92/167 (55%), Gaps = 9/167 (5%)

Query: 218 LRRLADTDQMTGLANRRHFLTASQEAWKLAGRLGRPTALMMFDVDHFKQVNDSQGHAAGD 277
           L RL+ TD++TGLANRR    A      +  R G+P A +M D+DHFK +ND  GHA GD
Sbjct: 350 LERLSGTDELTGLANRRLLADAGARIVSICRRAGQPCACLMLDLDHFKHINDVHGHATGD 409

Query: 278 AALVDLARNVREVLRDIDIFGRMGGEEFAITLPGCDLVAAAVIAERVRRAVAESRGEGPA 337
             L  LA  +   +R  D   RMGGEEFAI  P  D   A  +AER+RR V         
Sbjct: 410 EVLRRLAAAIMATVRSSDFAVRMGGEEFAIIAPNTDATHAMALAERLRRNVERIDLRQAD 469

Query: 338 ITISLGLTILVAG---------EPFDTALKRADHGLYQAKAAGRNRV 375
           + + + +++ VAG          P +  L RADH LY+AK AGRNRV
Sbjct: 470 MPVPVAISVGVAGMTVTPRYGAGPLEDLLARADHALYRAKQAGRNRV 516