Pairwise Alignments

Query, 193 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

Subject, 186 a.a., RNA polymerase sigma factor, sigma-70 family from Pseudomonas stutzeri RCH2

 Score = 78.6 bits (192), Expect = 6e-20
 Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)

Query: 16  DSADEELMALVRDNDREAFRTLVTRHIDRVVGVARRVVGPT-EAEDIAQDVFLKLWTNRD 74
           +  ++EL+      DR+AF  LV  H  RV    RR++G T EA D+ Q+ F++ +    
Sbjct: 2   NECEQELIQQAVRGDRQAFGALVRAHQARVFHFIRRLLGSTDEAADLTQETFIRAYQALP 61

Query: 75  QWQPGAGSFRTWLYRVVTNRCIDHTRKR---TAIPIDDAPEIPDDARGPLENCHASETAD 131
           +W+P A   +TWL ++  N  +D  R+R     +  D+  E  D A  PL    ++   +
Sbjct: 62  RWRPEA-RLQTWLLQIARNAALDLLRQRQRHVVLAADEQAEPIDPAPSPLRRLQSARDLE 120

Query: 132 RVRQALRFLSEPQRMAITLYYNEDLTAAEVATVMDLSLNAVESLLKRGRHKL 183
            + + L  L   QR  + L   E L+  E+A  + L+   V+S L R R  L
Sbjct: 121 MLERLLARLPHEQREILLLREVEGLSYDELAATLQLNAGTVKSRLARAREAL 172