Pairwise Alignments

Query, 298 a.a., Flagellin-like (NCBI) from Rhodospirillum rubrum S1H

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (262), Expect = 2e-27
 Identities = 58/152 (38%), Positives = 91/152 (59%), Gaps = 2/152 (1%)

Query: 4   ITTNTSANSALRYLNMNAAEQTNSLNRIASGSKINRASDDASGLAVATKLQTNVSTLNQA 63
           + TN SA +A RYL     E   S+ R++SG++IN A DDA+GL ++ +L      L+ A
Sbjct: 5   VNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDVA 64

Query: 64  ATNASHATSILQTADGGLSQISDILQRMKTLTAQSISGAVTNTERAYINAEYDQLVKEID 123
             NA+   SI QTA+G +++ + ILQRM+ L  QS +G  + +ER  +N E   L  E++
Sbjct: 65  MRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQDELN 124

Query: 124 SIVASTTFNGDQLLKGTGAGYSGSFLVGTNAG 155
            I  +T+F G +LL G+      SF +G+++G
Sbjct: 125 RIAETTSFGGRKLLNGSFG--EASFQIGSSSG 154



 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 6/127 (4%)

Query: 178 DGTFNAVAGLDLETTLYKS-GATTNKEDID-----AAQLAATAIDKAISAVAGARADVGA 231
           +G FN   GL  E  L    G  T  +DID      +Q A   ID A+  V   RAD+GA
Sbjct: 253 EGNFNISGGLATELGLNGGPGVKTTVQDIDITSVGGSQNAVGIIDAALKYVDSQRADLGA 312

Query: 232 QMSRFQFQAAQIASSTENLDAAQSAITDADVAKEQSNFSSAQVKTNAAIAALSQANQMPQ 291
           + +R     + +++  EN++A++S I D D AKE +  + +Q+   A  + L+QA Q+P 
Sbjct: 313 KQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQLPN 372

Query: 292 QLLQLLR 298
             + LL+
Sbjct: 373 SAISLLQ 379