Pairwise Alignments

Query, 298 a.a., Flagellin-like (NCBI) from Rhodospirillum rubrum S1H

Subject, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

 Score =  131 bits (330), Expect = 2e-35
 Identities = 112/374 (29%), Positives = 171/374 (45%), Gaps = 82/374 (21%)

Query: 4   ITTNTSANSALRYLNMNAAEQTNSLNRIASGSKINRASDDASGLAVATKLQTNVSTLNQA 63
           + TN +A +A RYL      Q  S+ R++SG KIN A DDA+GL ++ +L      L+ A
Sbjct: 5   VNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDVA 64

Query: 64  ATNASHATSILQTADGGLSQISDILQRMKTLTAQSISGAVTNTERAYINAEYDQLVKEID 123
             NA+   SI QTA+G +++ ++ILQRM+ L+ QS +G+ + +ER  I  E   L  E++
Sbjct: 65  VRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDELN 124

Query: 124 SIVASTTFNGDQLLKGTGAGYSGSFLVGTN-------------------AGTSGSTANSD 164
            I  +T+F G++LL GT +  + SF +G +                    GTS   A   
Sbjct: 125 RIAETTSFGGNKLLNGTFS--TKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGK 182

Query: 165 IIDIKITSGT-----TLGD-------GTFNAVAGLDL-ETTLYKSGAT------------ 199
             D K+ +G      TL D        T NA  G D+ E   Y +G T            
Sbjct: 183 DKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQ 242

Query: 200 ------TNKEDIDA-------------AQLAATAIDKAISAVAGA--------------- 225
                  NK   D              A  A T     +++V GA               
Sbjct: 243 LQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQQSVAVIDSALKYVD 302

Query: 226 --RADVGAQMSRFQFQAAQIASSTENLDAAQSAITDADVAKEQSNFSSAQVKTNAAIAAL 283
             RA++GA  +RF    + + +  EN++A++S I D D AKE +  + +Q+ + A+ + L
Sbjct: 303 SHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQASSSVL 362

Query: 284 SQANQMPQQLLQLL 297
           +QA Q P   L LL
Sbjct: 363 AQAKQAPNAALSLL 376