Pairwise Alignments

Query, 750 a.a., Penicillin-binding protein 1A (NCBI) from Rhodospirillum rubrum S1H

Subject, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (429), Expect = 4e-46
 Identities = 109/272 (40%), Positives = 151/272 (55%), Gaps = 8/272 (2%)

Query: 81  EGTVVATRGVTAGRPVALAEMPASLVNAVIAFEDRRFRDHWGVDPRGIARAIWVNLRSGG 140
           +G ++A  G     P+ L EMP  L+ AVIA ED R+ +H+G DP GI RA +  L SG 
Sbjct: 64  DGKLIAQFGEKRRIPLKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGS 123

Query: 141 RTQGASTLTQQLVKNTLLTPEKTFTRKIQEAMLALWIERKLTKDEILERYLNSLYLGAGS 200
            +QGAST+TQQL +N  L+ EK   RK++E  +A+ IE+ L+K EILE YLN +YLG  S
Sbjct: 124 ASQGASTITQQLARNFFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRS 183

Query: 201 YGVDAAARRYFNKPVTDLSLAESAMIAGLIQAPARTGPTTALDVARQRAELVLDVMRDQG 260
           YGV AAA+ YF K V DL+L E A+IAGL +AP+   P  +++ A  R  +VL  M D+ 
Sbjct: 184 YGVGAAAQAYFGKEVKDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEK 243

Query: 261 LIGADEATWAKAHPASLAVPPVEL----PAYGAVS-DWIADEARKALGPLSGDFLVVSTL 315
            I   E   A+A P        E+    P    ++  W+ +   +     SG   V +T+
Sbjct: 244 YITKAEYDAARAEPVLPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSG-MNVYTTV 302

Query: 316 DRRLQVLAQQTIQEGMAA--EGAGLRATQAAL 345
           D +LQ  A Q     + A  E  G R  +  L
Sbjct: 303 DSKLQRAANQAAINNLLAYDERHGYRGAEKEL 334



 Score = 97.1 bits (240), Expect = 3e-24
 Identities = 99/329 (30%), Positives = 137/329 (41%), Gaps = 68/329 (20%)

Query: 344 ALVAMAPD-GRVLAMVGGRDYQESQFNRAVQARRQPGSIFKLFVYLTALSNNWRPDDPID 402
           A VAM P+ G V A+VGG ++  ++FNRA Q+ RQ GS  K F+Y  AL+        I+
Sbjct: 444 AFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTLATLIN 503

Query: 403 DTPLTI------DGWSPENYGGGAGHGSVPLRVAFAHSYNLAAVRLQEAVGREAVIATAR 456
           D P+          W P+N       G   LR+  A S N+ AVR+   VG +       
Sbjct: 504 DAPINQWDESQGTAWRPKN-SPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDETREYLT 562

Query: 457 SMGLK-DDLQPLPSLALGTFPATLLDLTSAFAAVAADRATVQPRVIEVLRTP-------- 507
             G K D L    ++ALG    T + +   F+  A +   V+P  I  +  P        
Sbjct: 563 RFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGNIEFSA 622

Query: 508 ---------GSGEIRPPVRQSGRAPWPRASALDLLNAVVTQ------------------- 539
                     S E+     Q   +P+     +   NA +T+                   
Sbjct: 623 EPKVVCHRECSSELDEFAEQDAASPY-APKVISEQNAFLTREMLYSNIWGGGEWSSDTGW 681

Query: 540 -GTG-RAAALGVPTY-GKTGTTQDNRDAWFIGFAGNLVIGVWVGNDD------------- 583
            GTG RA AL      GKTGTT D++DAW+ G+A  +V   WVG DD             
Sbjct: 682 NGTGWRAQALKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKTAPNRN 741

Query: 584 -ETPMTGISGGG---LPAKLWQSFAARAL 608
            E  ++G   GG   LPA  W  F + AL
Sbjct: 742 IEDDVSGAESGGKTALPA--WVEFMSLAL 768