Pairwise Alignments

Query, 373 a.a., extracellular solute-binding protein, family 3 (NCBI) from Rhodospirillum rubrum S1H

Subject, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  245 bits (625), Expect = 1e-69
 Identities = 135/334 (40%), Positives = 196/334 (58%), Gaps = 11/334 (3%)

Query: 43  AALTLAAPALAANGDTLTSIRDRGSVTCGTNP-IPGFGFPDSDGNWRGFFIDFCRALAAA 101
           A L+L+A A  +   TL  +  +G +TCG +  +PGF  P++ G W G  +++C+A+AAA
Sbjct: 17  AMLSLSASAAES---TLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEYCQAMAAA 73

Query: 102 TLGDPTAFEVVPVESNSRWEALNSHTTDVNVDGSTWTLSRDTALGFDFPGVLIYDGQRFL 161
            LGD T  + VP+ +  R+ AL S   DV    +TWTL RD+ALG +F GV  YDGQ F+
Sbjct: 74  VLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNYYDGQGFM 133

Query: 162 AKPSVPEGSVKAAAGLRVCIIMGTTAEVNLRDFLKKNDLEMTVIATESDEGAWTSFLKGR 221
            K  +   S K   G  VC+  GTT E+NL D+ + + +    +  ++       F  GR
Sbjct: 134 VKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTSKGFDAGR 193

Query: 222 CELFVNDGIGL-ALRNALHMTPPRVNHLMTEAISKEPLGPVVRGDDHQWLEINRWVLNVL 280
           C++   D  GL ALR  L++  P    ++ E ISKEPLGPVVR DD +W  + +WVL  +
Sbjct: 194 CDVLTTDQSGLYALR--LNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKWVLYAM 251

Query: 281 IAAEEAGISSTTLVDPSPTADLSSEDRVF-VGGPEDNAAALGLEPGWARRVIAAVGNYGE 339
           + AEE GI+S   VD    +D     R+  + GP+     LG+   W+ +++  VGNYGE
Sbjct: 252 VNAEEYGITSKN-VDEMMKSDNPEVKRILGLDGPK--GTGLGIRDDWSYQIVKQVGNYGE 308

Query: 340 VFDRNLGKGSEIGLDRGVNALWSEGGLMISPPLQ 373
            FDR +G GS + +DRGVNALW+ GG M +PP++
Sbjct: 309 SFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342