Pairwise Alignments

Query, 276 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 263 a.a., multidrug ABC transporter permease from Pseudomonas fluorescens FW300-N2C3

 Score =  107 bits (266), Expect = 4e-28
 Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 8/237 (3%)

Query: 26  REFTRFVRQPARLAGSIGQPLLFWLVLGSGLSPSFRPTGMAA----MSYTEYFYPGMLLM 81
           RE+ RFV Q  RL  ++ +PLL+ LV  +G   +     +A     + Y  Y  PG+  M
Sbjct: 14  REWLRFVLQRTRLLSALVRPLLWLLVFAAGFRAALGIAIIAPYDTYIPYEVYIVPGLACM 73

Query: 82  MVLFASVFSTITVIEDRDQGFLQGVLVAPVSRLAIVLGKVGGAAAIALFQSIVLLCAAPV 141
           ++LF  +  +++++ DR+ G ++ +L +P+ R  ++  K+   + I+L Q    L  A +
Sbjct: 74  ILLFNGMQGSLSMVYDREMGSMRVLLTSPLPRAFLLASKLLATSLISLLQVYAFLAIAWL 133

Query: 142 LGFSTGPLGYLLILVTLTLLSLGFTGLGFLTAWGMASTSGFHAVMMLVLMPLWFLSGALF 201
            G     +G LL L  L L++L  + LG L +  +     F  VM  V+ P++FLS AL+
Sbjct: 134 YGIQPPTMGLLLALPALLLVALMLSALGLLLSNAIRQLENFAGVMNFVIFPMFFLSSALY 193

Query: 202 P---VQGVPAVLEGLMMINPVTHGMTILRAPFYEAPGALLSDGSYLGSLAVVALWVV 255
           P   +Q     L  L  ++P THG+ ++R   YE    LL+    +G   V AL  V
Sbjct: 194 PLWKMQEASPWLYWLCAVSPFTHGVELVRFALYEQFN-LLAMAVCVGLTLVFALLAV 249