Pairwise Alignments

Query, 276 a.a., ABC-2 transporter component (NCBI) from Rhodospirillum rubrum S1H

Subject, 286 a.a., ABC-2 type transport system permease protein from Synechococcus elongatus PCC 7942

 Score = 90.9 bits (224), Expect = 3e-23
 Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 27/274 (9%)

Query: 7   PLSDPPRVSVPSVAFA-------LAKREFTRFVRQPARLAGSIGQPLLFWLVLGSGLSPS 59
           P S+   +S PS   A       L KR F +  R+P  L   + QPL+ WLVL   L  +
Sbjct: 6   PKSELSNLSEPSEFSAFLQETAGLTKRLFIQLQRRPTTLIAGVIQPLM-WLVLFGALFQN 64

Query: 60  FRPTGMAA--MSYTEYFYPGMLLMMVLFASVFSTITVIEDRDQGFLQGVLVAPV-SRLAI 116
             PTG     + Y ++   G+++      ++ + + V+ DR+ GFL  +LVAP+ SR +I
Sbjct: 65  -APTGFFGPEVRYGQFLGAGVIVFTAFSGALNAGLPVMFDREFGFLNRLLVAPLTSRFSI 123

Query: 117 VLGKVGGAAAIALFQSIVLLCAAPVLGFSTGPL-GYLLILVTLTLLSLGFTGLGFLTAWG 175
           V+        ++L Q+I +L  +  LG       G LL+L  + LL LG T L    A+ 
Sbjct: 124 VVASALYITTLSLIQTIAILLVSSALGAGLPTATGLLLVLTIVLLLVLGVTALSLGLAFS 183

Query: 176 MASTSGFHAVMMLVLMPLWFLSGALFPVQGVPAVLEGLMMINPVTHGMTILRAPFYE--- 232
           +       A + +  +PL F S AL P+  +P  L+ L  +NP+++ +  +R  +     
Sbjct: 184 LPGHIELIAAIFITNLPLLFASTALAPLDFMPTWLQWLASLNPLSYAIEPIRFLYLHDSW 243

Query: 233 --------APGALLSDGSYLGSLAVVALWVVLAL 258
                    P A +S G   G LA++A + V AL
Sbjct: 244 QWSDIAIATPFAEISIG---GCLAILAGFCVTAL 274