Pairwise Alignments

Query, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

Subject, 258 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  189 bits (479), Expect = 6e-53
 Identities = 100/241 (41%), Positives = 141/241 (58%), Gaps = 3/241 (1%)

Query: 5   RSVRARTSEWPTGTVIVPHSHPWCQLVYAIGGVTIVETPEGSWVVPPDRAVWVPAGITHC 64
           R+V A  +++P G ++  H H   QL+Y   GV  V T +G+WVVPP RAVW+P G+ H 
Sbjct: 14  RAVVAIGTDYPHGHLLPLHRHRRAQLLYGATGVMQVSTADGNWVVPPQRAVWIPPGVAHE 73

Query: 65  VRAARGGQNRSVYVTIEAAQAAGLPKGCKVVAVSPLTRELILEFGRRPDDYDEDGADGRL 124
           V    G   RS+Y  I+ A    +   C+V++VSPL R+L++E      DYDE G DG L
Sbjct: 74  VLML-GVSTRSLY--IKPAAVTAMDARCQVISVSPLMRQLLMEAVELAPDYDEAGRDGAL 130

Query: 125 VRVLLDQIAALPAQPLHLPWPRDPRALAVARALEADPADGRPLEEWAREAGASARTLART 184
           + +LL ++A     PLHLP P+DPR L + +     P       +WA +   S R+  R 
Sbjct: 131 IDLLLHELARSAHLPLHLPLPKDPRLLGLCQGFLKHPNAHVSPVQWAAQLHISLRSFNRL 190

Query: 185 FRADCGLTFGQWRLRLRLLGALERLAAGEAVTAVAFDMGYDQPSAFIAMFRRLLGTTPGA 244
           F    G +F QWR +  ++ AL RLA G++VT +A D+GYD P+AF  MFRR+LG  P A
Sbjct: 191 FSQQTGASFSQWRQQACVMSALSRLAVGDSVTRIALDLGYDSPAAFSTMFRRVLGHAPSA 250

Query: 245 Y 245
           +
Sbjct: 251 W 251