Pairwise Alignments

Query, 550 a.a., PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

Subject, 439 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (253), Expect = 4e-26
 Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 41/278 (14%)

Query: 289 AQDALLVSEKMASLGQLVAGIAHEINTPIGTGVTAASLLAEKTQSLVQAVEA-------- 340
           AQ  L+ SEKMAS+GQL AGIAHEIN P+G   +    L++   SL + +++        
Sbjct: 162 AQGQLIQSEKMASIGQLSAGIAHEINNPVGFITSNLQTLSDYFNSLEKVLKSITQTIGQS 221

Query: 341 ----------GALRRSQLDAYLHVARESSRFILSNLTRAAELIQSFKQVA-VDQATDESR 389
                       L++ Q+D  L    E     L   +R   ++++ K+ + VD++  E  
Sbjct: 222 KDTALNEACQKILKQGQVDFILEDTAELITESLEGSSRVMSIVKNLKEFSHVDRS--EWS 279

Query: 390 LFKVRDYLEEILLSLQPRLKRTPHTMTLE------CPDDLAMYGPPGALFRVITNLVINS 443
              + + +E  L  +   +K   + +TLE       PD   ++  P  + +V+ N+++N+
Sbjct: 280 YANLENCIESTLKIINNEIK---YNITLEKHYAANVPD---VFCQPMQINQVLLNILVNA 333

Query: 444 LMHGLEEGATAPPGHMVLRVGHEKDTDCVVFRYHDTGRGIPEKNLKRIFDPFFTTRRGEG 503
                   A    G + + +    D D V     DTG GIPE+  +RIF+PFFTT+    
Sbjct: 334 ------SHAIKGEGTITITLQSAGD-DFVEIHIRDTGCGIPEEIRERIFEPFFTTKPVGS 386

Query: 504 GTGLGLHIVYNLVTQTLGGSLAVHSPPGQGAIFLIRVP 541
           GTGLGL + Y ++ +   G+++V S  G+G+ F IR+P
Sbjct: 387 GTGLGLSVSYGIINKH-NGTISVTSEVGKGSEFTIRLP 423